Center for Agricultural Systems Biology (CASB), Systems Biology and Bioinformatics Research Laboratory, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bang Khun Thian, Bangkok, Thailand.
Bioinformatics and Systems Biology Program, School of Bioresources and Technology, King Mongkut's University of Technology Thonburi, Bang Khun Thian, Bangkok, Thailand.
PLoS One. 2023 Oct 20;18(10):e0287293. doi: 10.1371/journal.pone.0287293. eCollection 2023.
Leaf area (LA) and biomass are important agronomic indicators of the growth and health of plants. Conventional methods for measuring the LA can be challenging, time-consuming, costly, and laborious, especially for a large-scale study. A hybrid approach of cluster-based photography and modeling was, thus, developed herein to improve practicality. To this end, data on cassava palmate leaves were collected under various conditions to cover a spectrum of viable leaf shapes and sizes. A total of 1,899 leaves from 3 cassava genotypes and 5 cultivation conditions were first assigned into clusters by size, based on their length (L) and width (W). Next, 111 representative leaves from all clusters were photographed, and data from image-processing were subsequently used for model development. The model based on the product of L and W outperformed the rest (R2 = 0.9566, RMSE = 20.00). The hybrid model was successfully used to estimate the LA of greenhouse-grown cassava as validation. This represents a breakthrough in the search for efficient, practical phenotyping tools for LA estimation, especially for large-scale experiments or remote fields with limited machinery.
叶面积(LA)和生物量是植物生长和健康的重要农艺指标。传统的 LA 测量方法具有挑战性、耗时、昂贵且费力,特别是对于大规模研究而言。因此,本文开发了一种基于聚类摄影和建模的混合方法来提高实用性。为此,在各种条件下收集了芭蕉叶的数据,以涵盖各种可行的叶片形状和大小。首先,根据长度(L)和宽度(W)将 3 种木薯基因型和 5 种栽培条件下的总共 1899 片叶子按大小分配到聚类中。然后,对所有聚类中的 111 个代表性叶片进行拍照,并使用图像处理数据进行模型开发。基于 L 和 W 的乘积的模型表现优于其他模型(R2=0.9566,RMSE=20.00)。该混合模型成功用于验证温室种植木薯的 LA 估计。这是在寻找高效、实用的 LA 估计表型工具方面的突破,特别是对于大规模实验或机器有限的偏远地区。