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构建微等离子体射流器件紧凑型阵列及其在. 的随机诱变中的应用

Construction of a Compact Array of Microplasma Jet Devices and Its Application for Random Mutagenesis of .

机构信息

Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States.

DOE Center for Advanced Bioenergy and Bioproducts Innovation, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States.

出版信息

ACS Synth Biol. 2023 Nov 17;12(11):3406-3413. doi: 10.1021/acssynbio.3c00443. Epub 2023 Oct 21.

Abstract

A small and efficient DNA mutation-inducing machine was constructed with an array of microplasma jet devices (7 × 1) that can be operated at atmospheric pressure for microbial mutagenesis. Using this machine, we report disruption of a plasmid DNA and generation of mutants of an oleaginous yeast . Specifically, a compact-sized microplasma channel (25 × 20 × 2 mm) capable of generating an electron density of greater than 10 cm was constructed to produce reactive species (N*, N, O, OH, and H) under helium atmospheric conditions to induce DNA mutagenesis. The length of microplasma channels in the device played a critical role in augmenting both the volume of plasma and the concentration of reactive species. First, we confirmed that microplasma treatment can linearize a plasmid by creating nicks . Second, we treated cells with a jet device containing 7 microchannels for 5 min; 94.8% of the treated cells were killed, and 0.44% of surviving cells showed different colony colors as compared to their parental colony. Microplasma-based DNA mutation is energy-efficient and can be a safe alternative for inducing mutations compared to conventional methods using toxic mutagens. This compact and scalable device is amenable for industrial strain improvement involving large-scale mutagenesis.

摘要

我们构建了一个由微等离子体射流器件组成的小型高效 DNA 诱变机器阵列(7×1),可在大气压下操作,用于微生物诱变。使用该机器,我们报告了质粒 DNA 的破坏和产油酵母突变体的产生。具体来说,构建了一个能够在氦气大气条件下产生大于 10 cm 的电子密度的紧凑型微等离子体通道(25×20×2mm),以产生活性物质(N*、N、O、OH 和 H),从而诱导 DNA 突变。器件中微等离子体通道的长度在增加等离子体体积和活性物质浓度方面起着关键作用。首先,我们通过创建缺口证实了微等离子体处理可以使质粒线性化。其次,我们用包含 7 个微通道的射流装置处理细胞 5 分钟;94.8%的处理细胞被杀死,而 0.44%的存活细胞与亲代菌落相比显示出不同的菌落颜色。与使用有毒诱变剂的传统方法相比,基于微等离子体的 DNA 突变是节能的,并且可以作为诱导突变的安全替代方法。这种紧凑且可扩展的设备适用于涉及大规模诱变的工业菌株改良。

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