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甲硝唑和氯霉素与肌红蛋白的相互作用:肌红蛋白-乙酰胺产物的晶体结构

Interactions of metronidazole and chloramphenicol with myoglobin: Crystal structure of a Mb-acetamide product.

作者信息

Powell Samantha M, Prather Kiana Y, Nguyen Nancy, Thomas Leonard M, Richter-Addo George B

机构信息

Price Family Foundation Institute of Structural Biology, Stephenson Life Sciences Research Center, and Department of Chemistry and Biochemistry, University of Oklahoma, 101 Stephenson Parkway, Norman, OK, U.S.A. 73019.

Biological Sciences Division, Pacific Northwest National Laboratory, 902 Batelle Blvd, Richland, WA, U.S.A. 99352.

出版信息

J Porphyr Phthalocyanines. 2023 Jul-Oct;27(7-10):1142-1147. doi: 10.1142/s1088424623500700.

Abstract

Nitroorganics present a general concern for a safe environment due to their health hazards. However, some nitroorganics such as metronidazole (Mtz) and chloramphenicol (CAM) also possess medicinal value. Mtz and CAM can undergo reductive bioactivation presumably via their nitroso derivatives. We show, using UV-vis spectroscopy, that sperm whale myoglobin (swMb) and its distal pocket mutants retaining H-bonding capacity react with Mtz in the presence of dithionite to generate products with spectra suggestive of the Fe-bound nitroso (Fe-RNO; λ ~420 nm) forms. We have crystallized and solved the X-ray crystal structure of an H64Q swMb-acetamide compound to 1.76 Å resolution; formation of this compound results from the serendipitous crystallographic trapping, by the heme center, of acetamide from the reductive decomposition of Mtz. Only one of the swMb proteins, namely H64Q swMb with a relatively flexible Gln64 residue, reacted with CAM presumably due to the bulky nature of CAM that generally may restrict its access to the heme site.

摘要

由于其健康危害,硝基有机物对安全环境构成普遍担忧。然而,一些硝基有机物如甲硝唑(Mtz)和氯霉素(CAM)也具有药用价值。Mtz和CAM可能通过其亚硝基衍生物进行还原性生物活化。我们利用紫外可见光谱表明,抹香鲸肌红蛋白(swMb)及其保留氢键能力的远端口袋突变体在连二亚硫酸盐存在下与Mtz反应,生成具有光谱特征的产物,表明形成了与铁结合的亚硝基(Fe-RNO;λ~420nm)形式。我们已将H64Q swMb-乙酰胺化合物结晶并解析其X射线晶体结构至1.76Å分辨率;该化合物的形成是由于血红素中心偶然捕获了Mtz还原分解产生的乙酰胺。只有一种swMb蛋白,即具有相对灵活的Gln64残基的H64Q swMb,与CAM反应,可能是由于CAM体积较大,通常可能限制其进入血红素位点。

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