Universite Grenoble Alpes, CNRS, CEA, Institut de Biologie Structurale, 71 avenue des Martyrs-CS10090, Grenoble cedex 9, 38044, France.
International Institute of Molecular and Cell Biology in Warsaw, 4 Ks. Trojdena Street, 02-109, Warsaw, Poland.
Nat Commun. 2023 Oct 23;14(1):6706. doi: 10.1038/s41467-023-42506-w.
Peptidoglycan, a gigadalton polymer, functions as the scaffold for bacterial cell walls and provides cell integrity. Peptidoglycan is remodelled by a large and diverse group of peptidoglycan hydrolases, which control bacterial cell growth and division. Over the years, many studies have focused on these enzymes, but knowledge on their action within peptidoglycan mesh from a molecular basis is scarce. Here, we provide structural insights into the interaction between short peptidoglycan fragments and the entire sacculus with two evolutionarily related peptidases of the M23 family, lysostaphin and LytM. Through nuclear magnetic resonance, mass spectrometry, information-driven modelling, site-directed mutagenesis and biochemical approaches, we propose a model in which peptidoglycan cross-linking affects the activity, selectivity and specificity of these two structurally related enzymes differently.
肽聚糖是一种巨大的聚合物,作为细菌细胞壁的支架,为其提供细胞完整性。肽聚糖由一大组不同的肽聚糖水解酶重塑,这些酶控制着细菌的生长和分裂。多年来,许多研究都集中在这些酶上,但从分子基础上了解它们在肽聚糖网格中的作用的知识还很缺乏。在这里,我们提供了结构上的见解,说明了两种进化相关的 M23 家族肽酶(溶葡萄球菌酶和 LytM)与短肽聚糖片段和整个质膜之间的相互作用。通过核磁共振、质谱、信息驱动建模、定点突变和生化方法,我们提出了一个模型,即肽聚糖交联以不同的方式影响这两种结构相关酶的活性、选择性和特异性。