Health and Biomedical Innovation, Clinical and Health Sciences, University of South Australia, Adelaide, South Australia 5000, Australia.
Quality Use of Medicines and Pharmacy Research Centre, Clinical and Health Sciences, University of South Australia, Adelaide, South Australia 5000, Australia.
ACS Infect Dis. 2023 Dec 8;9(12):2504-2522. doi: 10.1021/acsinfecdis.3c00350. Epub 2023 Oct 27.
The inhibition of efflux pumps is a promising approach to combating multidrug-resistant bacteria. We have developed a combined structure- and ligand-based model, using OpenEye software, for the identification of inhibitors of AcrB, the inner membrane protein component of the AcrAB-TolC efflux pump in . From a database of 1391 FDA-approved drugs, 23 compounds were selected to test for efflux inhibition in . Seven compounds, including ivacaftor (), butenafine (), naftifine (), pimozide (), thioridazine (), trifluoperazine (), and meloxicam (), enhanced the activity of at least one antimicrobial substrate and inhibited the efflux pump-mediated removal of the substrate Nile Red from cells. Ivacaftor () inhibited efflux dose dependently, had no effect on an strain with genomic deletion of the gene encoding AcrB, and did not damage the bacterial outer membrane. In the presence of a sub-minimum inhibitory concentration (MIC) of the outer membrane permeabilizer colistin, ivacaftor at 1 μg/mL reduced the MICs of erythromycin and minocycline by 4- to 8-fold. The identification of seven potential AcrB inhibitors shows the merits of a combined structure- and ligand-based approach to virtual screening.
抑制外排泵是一种有前途的对抗多药耐药细菌的方法。我们使用 OpenEye 软件开发了一种基于结构和配体的组合模型,用于鉴定 AcrB 的抑制剂,AcrB 是. 中的 AcrAB-TolC 外排泵的内膜蛋白成分。从一个包含 1391 种 FDA 批准药物的数据库中,选择了 23 种化合物来测试. 中的外排抑制作用。七种化合物,包括 ivacaftor ()、布替萘芬 ()、萘替芬 ()、匹莫齐特 ()、硫利达嗪 ()、三氟拉嗪 ()和 meloxicam (),增强了至少一种抗菌底物的活性,并抑制了底物 Nile Red 通过细胞的外排泵介导的去除。Ivacaftor () 呈剂量依赖性抑制外排,对基因组缺失编码 AcrB 的基因的. 菌株没有影响,也不会破坏细菌的外膜。在最低抑菌浓度 (MIC) 的外膜通透剂黏菌素存在下,1 μg/mL 的 ivacaftor 将红霉素和米诺环素的 MIC 降低了 4 到 8 倍。七种潜在的 AcrB 抑制剂的鉴定表明,基于结构和配体的组合方法进行虚拟筛选具有优势。
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