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已知肾素抑制剂的理论研究及基于配体的高血压治疗药效团模型的构建

Theoretical investigation on known renin inhibitors and generation of ligand-based pharmacophore models for hypertension treatment.

作者信息

Loganathan Lakshmanan, Sankar Jeyanthi, Rajendran Kannan, Muthusamy Karthikeyan

机构信息

Pharmacogenomics and CADD Lab, Department of Bioinformatics, Alagappa University, Karaikudi, India.

Department of General Medicine, Saveetha Medical College and Hospital, Chennai, India.

出版信息

J Biomol Struct Dyn. 2024;42(24):13411-13420. doi: 10.1080/07391102.2023.2275186. Epub 2023 Oct 28.

Abstract

The renin enzyme is considered a promising target for hypertension and renal diseases. Over the last three decades, several experimental and theoretical studies have been engaged in the discovery of potent renin inhibitors. The identified inhibitors that undergo clinical trials are still failing to meet the criteria of potency and safety. To date, there is no specific FDA-approved drug for renin inhibition. Our theoretical opinion describes that the most potent compounds identified in experimental studies but lacking safety and overdose issues could be solved by finding similar molecules that are stable, very active, and have no side effects, which will kick start the drug discovery process. Here, we utilized the most potent direct renin inhibitors reported earlier, followed further by our theoretical study reported in 2019. Ligand-based virtual screening, density functional theory, and dynamic simulation studies were employed to explore the identified compounds and co-crystallized molecule in the protein structure. From the diverse databases, we have identified several identical molecules based on their structural features, such as functional groups like hydrophobic (H), aromatic rings (R), hydrogen bond acceptor (A), and donor (D). The HHHPR five-point pharmacophore feature was identified as a template pharmacophore to search the potential compounds from the Enamine and LifeChemical databases and have a good fitness score with known renin inhibitors. Furthermore, theoretical validation was done through several studies that confirmed the activity of the identified molecules. Overall, we propose that these compounds might break the failure in adverse events and improve the potency of hypertension treatment.Communicated by Ramaswamy H. Sarma.

摘要

肾素酶被认为是治疗高血压和肾脏疾病的一个有前景的靶点。在过去三十年里,已经开展了多项实验和理论研究来发现强效的肾素抑制剂。已进入临床试验的已鉴定抑制剂仍未达到效力和安全性标准。迄今为止,尚无美国食品药品监督管理局(FDA)批准的用于抑制肾素的特定药物。我们的理论观点认为,在实验研究中鉴定出的最有效的化合物,但存在安全性和过量问题,可以通过寻找稳定、活性高且无副作用的类似分子来解决,这将启动药物发现过程。在此,我们利用了先前报道的最有效的直接肾素抑制剂,随后是我们在2019年报道的理论研究。采用基于配体的虚拟筛选、密度泛函理论和动态模拟研究来探索蛋白质结构中已鉴定的化合物和共结晶分子。从不同的数据库中,我们根据其结构特征鉴定出了几种相同的分子,如疏水基团(H)、芳香环(R)、氢键受体(A)和供体(D)等官能团。HHHPR五点药效团特征被确定为模板药效团,用于从Enamine和LifeChemical数据库中搜索潜在化合物,并与已知的肾素抑制剂具有良好的拟合分数。此外,通过多项研究进行了理论验证,证实了已鉴定分子的活性。总体而言,我们认为这些化合物可能会打破不良事件方面的失败局面,并提高高血压治疗的效力。由拉马斯瓦米·H·萨尔马传达。

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