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高通量表型筛选和机器学习方法助力广谱低毒性抗锥虫药物的选择。

High-Throughput Phenotypic Screening and Machine Learning Methods Enabled the Selection of Broad-Spectrum Low-Toxicity Antitrypanosomatidic Agents.

机构信息

Department of Life Sciences, University of Modena and Reggio Emilia, Via Campi 103, 41125 Modena, Italy.

Collaborations Pharmaceuticals, Inc., 840 Main Campus Drive, Lab 3510, Raleigh, North Carolina 27606, United States.

出版信息

J Med Chem. 2023 Nov 23;66(22):15230-15255. doi: 10.1021/acs.jmedchem.3c01322. Epub 2023 Nov 3.

Abstract

Broad-spectrum anti-infective chemotherapy agents with activity against , and species were identified from a high-throughput phenotypic screening program of the 456 compounds belonging to the Ty-Box, an in-house industry database. Compound characterization using machine learning approaches enabled the identification and synthesis of 44 compounds with broad-spectrum antiparasitic activity and minimal toxicity against , and . In vitro studies confirmed the predictive models identified in compound which emerged as a new lead, featured by an innovative -(5-pyrimidinyl)benzenesulfonamide scaffold and promising low micromolar activity against two parasites and low toxicity. Given the volume and complexity of data generated by the diverse high-throughput screening assays performed on the compounds of the Ty-Box library, the chemoinformatic and machine learning tools enabled the selection of compounds eligible for further evaluation of their biological and toxicological activities and aided in the decision-making process toward the design and optimization of the identified lead.

摘要

从属于 Ty-Box 内部行业数据库的 456 种化合物的高通量表型筛选计划中,发现了具有针对 、 和 种属活性的广谱抗感染化疗药物。使用机器学习方法进行化合物特征描述,有助于识别和合成 44 种具有广谱抗寄生虫活性和针对 、 和 最小毒性的化合物。体外研究证实了化合物中识别出的预测模型,该模型成为一种新的先导化合物,其特点是具有创新性的 -(5-嘧啶基)苯磺酰胺骨架,对两种寄生虫具有有前景的低微摩尔活性和低毒性。鉴于在 Ty-Box 文库的化合物上进行的各种高通量筛选测定所产生的数据量和复杂性,化学生信学和机器学习工具能够选择有资格进一步评估其生物学和毒理学活性的化合物,并有助于在设计和优化鉴定的先导化合物方面做出决策。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c6d/10683024/c430fe885e60/jm3c01322_0001.jpg

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