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肌萎缩侧索硬化症的基因组学和转录组学进展

Genomic and transcriptomic advances in amyotrophic lateral sclerosis.

作者信息

Rizzuti Mafalda, Sali Luca, Melzi Valentina, Scarcella Simone, Costamagna Gianluca, Ottoboni Linda, Quetti Lorenzo, Brambilla Lorenzo, Papadimitriou Dimitra, Verde Federico, Ratti Antonia, Ticozzi Nicola, Comi Giacomo Pietro, Corti Stefania, Gagliardi Delia

机构信息

Neurology Unit, Foundation IRCCS Ca' Granda Ospedale Maggiore Policlinico, Milan, Italy.

Department of Pathophysiology and Transplantation, Dino Ferrari Center, Università degli Studi di Milano, Milan, Italy.

出版信息

Ageing Res Rev. 2023 Dec;92:102126. doi: 10.1016/j.arr.2023.102126. Epub 2023 Nov 14.

DOI:10.1016/j.arr.2023.102126
PMID:37972860
Abstract

Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disorder and the most common motor neuron disease. ALS shows substantial clinical and molecular heterogeneity. In vitro and in vivo models coupled with multiomic techniques have provided important contributions to unraveling the pathomechanisms underlying ALS. To date, despite promising results and accumulating knowledge, an effective treatment is still lacking. Here, we provide an overview of the literature on the use of genomics, epigenomics, transcriptomics and microRNAs to deeply investigate the molecular mechanisms developing and sustaining ALS. We report the most relevant genes implicated in ALS pathogenesis, discussing the use of different high-throughput sequencing techniques and the role of epigenomic modifications. Furthermore, we present transcriptomic studies discussing the most recent advances, from microarrays to bulk and single-cell RNA sequencing. Finally, we discuss the use of microRNAs as potential biomarkers and promising tools for molecular intervention. The integration of data from multiple omic approaches may provide new insights into pathogenic pathways in ALS by shedding light on diagnostic and prognostic biomarkers, helping to stratify patients into clinically relevant subgroups, revealing novel therapeutic targets and supporting the development of new effective therapies.

摘要

肌萎缩侧索硬化症(ALS)是一种神经退行性疾病,也是最常见的运动神经元疾病。ALS表现出显著的临床和分子异质性。体外和体内模型与多组学技术相结合,为揭示ALS潜在的发病机制做出了重要贡献。迄今为止,尽管取得了令人鼓舞的结果且知识不断积累,但仍缺乏有效的治疗方法。在此,我们概述了有关使用基因组学、表观基因组学、转录组学和微小RNA来深入研究ALS发生和持续发展的分子机制的文献。我们报告了与ALS发病机制相关的最关键基因,讨论了不同高通量测序技术的应用以及表观基因组修饰的作用。此外,我们介绍了转录组学研究,讨论了从微阵列到批量和单细胞RNA测序的最新进展。最后,我们讨论了微小RNA作为潜在生物标志物以及分子干预的有前景工具的应用。整合来自多种组学方法的数据,可能通过揭示诊断和预后生物标志物、帮助将患者分层到临床相关亚组、揭示新的治疗靶点以及支持新的有效疗法的开发,为ALS的致病途径提供新的见解。

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Genomic and transcriptomic advances in amyotrophic lateral sclerosis.肌萎缩侧索硬化症的基因组学和转录组学进展
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