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通过红外光谱和振动圆二色光谱研究不同pH值下四氢-2-噻吩甲酸在水中的构象分布。

Conformational distributions of tetrahydro-2-turoic acid in water at different pH values by their IR and vibrational circular dichroism spectra.

作者信息

Yang Yanqing, Alshalalfeh Mutasem, Xu Yunjie

机构信息

Department of Chemistry, University of Alberta, Edmonton, AB, T6G 2G2, Canada.

Department of Chemistry, University of Alberta, Edmonton, AB, T6G 2G2, Canada.

出版信息

Spectrochim Acta A Mol Biomol Spectrosc. 2024 Feb 15;307:123634. doi: 10.1016/j.saa.2023.123634. Epub 2023 Nov 8.

Abstract

Infrared (IR) and vibrational circular dichroism (VCD) spectra of tetrahydro-2-furoic acid (THFA) in aqueous solutions under several different pH conditions were recorded. To interpret the IR and VCD spectra of THFA obtained in highly acidic and basic aqueous solutions, extensive and systematic conformational searches were conducted to acquire the low-energy minima for both the neutral and deprotonated forms of THFA species, as well as their hydrated clusters. This was accomplished by using the conformer-rotamer ensemble sampling tool (CREST) with an implicit solvation model for water. The CREST candidates were further optimized at the B3LYP-D3BJ/def2-TZVP level of theory. The simulated VCD spectra of the neutral THFA conformers in the polarizable continuum model (PCM) of water alone exhibit little agreement with the experimental data under highly acidic conditions. Applying the clusters-in-a-liquid solvation model by considering the monohydrate THFA conformers in the PCM of water, significantly improved agreement with the experimental data. Similarly, the deprotonated THFA species solvated with one to four explicit water molecules in the PCM of water were considered. While the IR and VCD spectra of the deprotonated THFA monohydrate conformers offer the best agreement with the experimental data, other larger hydrated clusters, particularly the dihydrates, also contribute to the spectra. Through the synergistic combined experimental and theoretical approach used in the study, comprehensive conformational distributions of the predominant THFA species across various pH conditions were extracted.

摘要

记录了四氢-2-呋喃甲酸(THFA)在几种不同pH条件下的水溶液中的红外(IR)光谱和振动圆二色性(VCD)光谱。为了解释在高酸性和碱性水溶液中获得的THFA的IR和VCD光谱,进行了广泛而系统的构象搜索,以获取THFA物种的中性和去质子化形式及其水合簇的低能量极小值。这是通过使用构象异构体-旋转异构体系综采样工具(CREST)和水的隐式溶剂化模型来完成的。CREST候选物在B3LYP-D3BJ/def2-TZVP理论水平上进一步优化。仅在水的极化连续介质模型(PCM)中,中性THFA构象异构体的模拟VCD光谱与高酸性条件下的实验数据几乎没有一致性。通过在水的PCM中考虑一水合THFA构象异构体应用液体中簇的溶剂化模型,与实验数据的一致性显著提高。同样,考虑了在水的PCM中用一到四个显式水分子溶剂化的去质子化THFA物种。虽然去质子化THFA一水合物构象异构体的IR和VCD光谱与实验数据的一致性最好,但其他更大的水合簇,特别是二水合物,也对光谱有贡献。通过该研究中使用的协同结合实验和理论方法,提取了不同pH条件下主要THFA物种的全面构象分布。

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