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环状 RNA 为中心的 ceRNA 调控网络在脓毒症诱导的急性肾损伤中的作用。

Regulatory networks of circRNA- centred ceRNAs in sepsis-induced acute kidney injury.

机构信息

Department of Critical Care Medicine, Nanfang Hospital, Southern Medical University, Guangzhou, China.

出版信息

Epigenetics. 2023 Dec;18(1):2278960. doi: 10.1080/15592294.2023.2278960. Epub 2023 Nov 18.

Abstract

Sepsis is the primary cause of acute kidney injury (AKI) and is associated with high mortality rates. Growing evidence suggests that noncoding RNAs are vitally involved in kidney illnesses, whereas the role of circular RNAs (circRNAs) in sepsis-induced AKI (SAKI) remains largely unknown. In this present study, caecal ligation and puncture (CLP) in mice was performed to establish an SAKI model. The expression of circRNAs and mRNAs was analysed using circRNA microarray or next-generation sequencing. The results revealed that the expressions of 197 circRNAs and 2509 mRNAs were dysregulated. Validation of the selected circRNAs was performed by qRT-PCR. Bioinformatics analyses and chromatin immunoprecipitation demonstrated that NF-κB/p65 signalling induced the upregulation of circC3, circZbtb16, and circFkbp5 and their linear counterparts by p65 transcription in mouse tubular epithelial cells (mTECs). Furthermore, competitive endogenous RNA (ceRNA) networks demonstrated that some components of NF-κB signalling were potential targets of these dysregulated circRNAs. Among them, Tnf-α was increased by circFkbp5 through the downregulation of miR-760-3p in lipopolysaccharide (LPS)-stimulated mTECs. Knocking down circFkbp5 inhibited the p65 phosphorylation and apoptosis in injured mTECs. These findings suggest that the selected circRNAs and the related ceRNA networks provide new knowledge into the fundamental mechanism of SAKI and circFkbp5/miR-760-3p/Tnf-α axis might be therapeutic targets.

摘要

脓毒症是急性肾损伤(AKI)的主要原因,与高死亡率相关。越来越多的证据表明,非编码 RNA 与肾脏疾病密切相关,而环状 RNA(circRNA)在脓毒症诱导的急性肾损伤(SAKI)中的作用仍知之甚少。在本研究中,通过盲肠结扎穿孔(CLP)建立了 SAKI 小鼠模型。利用 circRNA 微阵列或下一代测序分析 circRNA 和 mRNA 的表达。结果显示,197 个 circRNA 和 2509 个 mRNA 的表达失调。通过 qRT-PCR 对所选 circRNA 进行验证。生物信息学分析和染色质免疫沉淀实验表明,NF-κB/p65 信号通路通过 p65 转录诱导小鼠肾小管上皮细胞(mTEC)中 circC3、circZbtb16 和 circFkbp5 及其线性对应物的上调。此外,竞争性内源 RNA(ceRNA)网络表明,NF-κB 信号通路的一些成分可能是这些失调 circRNA 的潜在靶点。其中,circFkbp5 通过下调 LPS 刺激的 mTEC 中 miR-760-3p 增加了 Tnf-α。敲低 circFkbp5 抑制了受损 mTEC 中 p65 的磷酸化和凋亡。这些发现表明,所选 circRNA 及其相关的 ceRNA 网络为 SAKI 的基本机制提供了新的认识,circFkbp5/miR-760-3p/Tnf-α 轴可能是治疗靶点。

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