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赖氨酸水溶液的温度依赖性水合行为:通过介电谱研究蛋白质结合的一种方法。

Temperature-dependent hydration behavior of aqueous lysine: an approach towards protein binding through dielectric spectroscopy.

作者信息

Alwaleedy Suad, Karale Ravikant R, Kabara Komal B, Kamble Savita, Al Hamdani Saeed, Kumbharkhane Ashok C, Sarode Arvind V

机构信息

School of Physical Sciences, Swami Ramanand Teerth Marathwada University, Nanded, Maharashtra, India.

Department of Physics, Taiz University, Taiz, Yemen.

出版信息

J Biomol Struct Dyn. 2025 Jan;43(1):437-449. doi: 10.1080/07391102.2023.2281642. Epub 2023 Nov 20.

DOI:10.1080/07391102.2023.2281642
PMID:37986142
Abstract

Present work reports interaction between water and amino acid lysine for understanding the physicochemical properties that will be useful in the structure formation of protein. The dielectric relaxation of aqueous lysine was systematically investigated over a temperature range spanning from 298.15 K to 278.15 K, encompassing frequencies ranging from 10 MHz to 30 GHz, and across a concentration range of 0.152 M to 0.610 M. Within this study, aqueous lysine revealed the presence of two distinct relaxation modes. The low-frequency relaxation process (l-process) is primarily associated with the relaxation of lysine molecules, whereas the high-frequency relaxation process (h-process) is attributed to water molecules interacting with lysine. Several key dielectric parameters, including static dielectric constant (ε), relaxation time (τ), dipole moment (μ), correlation factor (g), and the number of water molecules rotationally bonded by solute molecules (Z), were meticulously determined. These parameters were interpreted in terms of molecular interactions, hydrogen bonding, hydrophobicity, and Lys-Lys binding. Additionally, various thermodynamic parameters such as molar enthalpy (ΔH), molar entropy (ΔS), and molar free energy (ΔF) were calculated to provide further insights into the system's characteristics and behavior.Communicated by Ramaswamy H. Sarma.

摘要

目前的工作报道了水与氨基酸赖氨酸之间的相互作用,以了解对蛋白质结构形成有用的物理化学性质。在298.15 K至278.15 K的温度范围内,系统地研究了赖氨酸水溶液的介电弛豫,频率范围为10 MHz至30 GHz,浓度范围为0.152 M至0.610 M。在这项研究中,赖氨酸水溶液显示出两种不同的弛豫模式。低频弛豫过程(l-过程)主要与赖氨酸分子的弛豫有关,而高频弛豫过程(h-过程)则归因于水分子与赖氨酸的相互作用。精心测定了几个关键的介电参数,包括静态介电常数(ε)、弛豫时间(τ)、偶极矩(μ)、相关因子(g)以及被溶质分子旋转键合的水分子数(Z)。这些参数从分子相互作用、氢键、疏水性和赖氨酸-赖氨酸结合的角度进行了解释。此外,还计算了各种热力学参数,如摩尔焓(ΔH)、摩尔熵(ΔS)和摩尔自由能(ΔF),以进一步深入了解系统的特性和行为。由拉马斯瓦米·H·萨尔马传达。

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