Suppr超能文献

双敲可影响斑马鱼心脏收缩功能。

/ Double Knockout Affects Zebrafish Cardiac Contractile Function.

机构信息

The Laboratary of Heart Development Research, College of Life Science, Hunan Normal University, Changsha 410081, China.

出版信息

Int J Mol Sci. 2023 Nov 15;24(22):16364. doi: 10.3390/ijms242216364.

Abstract

Ankyrin repeat and suppression-of-cytokine-signaling box (Asb) proteins, a subset of ubiquitin ligase E3, include Asb5 with six ankyrin-repeat domains. Zebrafish harbor two gene isoforms, and . Currently, the effects of gene inactivation on zebrafish embryonic development and heart function are unknown. Using CRISPR/Cas9, we generated -knockout zebrafish, revealing no abnormal phenotypes at 48 h post-fertilization (hpf). In situ hybridization showed similar and expression patterns, indicating the functional redundancy of these isoforms. Morpholino interference was used to target in wild-type and -knockout zebrafish. Knocking down in the wild-type had no phenotypic impact, but simultaneous knockdown in -knockout homozygotes led to severe pericardial cavity enlargement and atrial dilation. RNA-seq and cluster analyses identified significantly enriched cardiac muscle contraction genes in the double-knockout at 48 hpf. Moreover, semi-automatic heartbeat analysis demonstrated significant changes in various heart function indicators. STRING database/Cytoscape analyses confirmed that 11 cardiac-contraction-related hub genes exhibited disrupted expression, with three modules containing these genes potentially regulating cardiac contractile function through calcium ion channels. This study reveals functional redundancy in and , with simultaneous knockout significantly impacting zebrafish early heart development and contraction, providing key insights into 's mechanism.

摘要

锚蛋白重复和细胞因子信号抑制盒(Asb)蛋白是泛素连接酶 E3 的一个亚类,包括具有六个锚蛋白重复结构域的 Asb5。斑马鱼拥有两种基因同工型和。目前,基因失活对斑马鱼胚胎发育和心脏功能的影响尚不清楚。我们使用 CRISPR/Cas9 产生了 -敲除斑马鱼,在受精后 48 小时(hpf)没有发现异常表型。原位杂交显示相似的和表达模式,表明这些同工型具有功能冗余性。使用形态发生素干扰来靶向野生型和 -敲除斑马鱼中的。在野生型中敲低不会产生表型影响,但在 -敲除纯合子中同时敲低会导致心包腔扩大和心房扩张严重。RNA-seq 和聚类分析在 48 hpf 的双敲除中鉴定出心肌收缩基因显著富集。此外,半自动心跳分析表明各种心脏功能指标发生显著变化。STRING 数据库/Cytoscape 分析证实,11 个与心肌收缩相关的枢纽基因的表达出现中断,其中三个包含这些基因的模块可能通过钙离子通道调节心脏收缩功能。这项研究揭示了和之间的功能冗余,同时敲除显著影响斑马鱼早期心脏发育和收缩,为 '的机制提供了重要见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/42e7/10671462/693fef4bcc57/ijms-24-16364-g001.jpg

相似文献

1
/ Double Knockout Affects Zebrafish Cardiac Contractile Function.
Int J Mol Sci. 2023 Nov 15;24(22):16364. doi: 10.3390/ijms242216364.
3
miR-731 modulates the zebrafish heart morphogenesis via targeting Calcineurin/Nfatc3a pathway.
Biochim Biophys Acta Gen Subj. 2022 Jun;1866(6):130133. doi: 10.1016/j.bbagen.2022.130133. Epub 2022 Mar 26.
4
Abnormal development of zebrafish after knockout and knockdown of ribosomal protein L10a.
Sci Rep. 2019 Dec 2;9(1):18130. doi: 10.1038/s41598-019-54544-w.
5
Heart-specific isoform of tropomyosin4 is essential for heartbeat in zebrafish embryos.
Cardiovasc Res. 2008 Nov 1;80(2):200-8. doi: 10.1093/cvr/cvn177. Epub 2008 Jun 25.
7
Rbfox-regulated alternative splicing is critical for zebrafish cardiac and skeletal muscle functions.
Dev Biol. 2011 Nov 15;359(2):251-61. doi: 10.1016/j.ydbio.2011.08.025. Epub 2011 Sep 7.
8
The knockdown of the maternal estrogen receptor 2a (esr2a) mRNA affects embryo transcript contents and larval development in zebrafish.
Gen Comp Endocrinol. 2011 May 15;172(1):120-9. doi: 10.1016/j.ygcen.2010.12.020. Epub 2011 Jan 1.
9
Famoxadone-cymoxanil induced cardiotoxicity in zebrafish embryos.
Ecotoxicol Environ Saf. 2020 Dec 1;205:111339. doi: 10.1016/j.ecoenv.2020.111339. Epub 2020 Sep 19.
10
Ambra1 knockdown in zebrafish leads to incomplete development due to severe defects in organogenesis.
Autophagy. 2013 Apr;9(4):476-95. doi: 10.4161/auto.23278. Epub 2013 Jan 24.

引用本文的文献

本文引用的文献

1
Variants in underlie distal arthrogryposis accompanied by congenital heart defects.
HGG Adv. 2023 Jun 15;4(3):100213. doi: 10.1016/j.xhgg.2023.100213. eCollection 2023 Jul 13.
2
CRISPR-Cas9-Mediated Genome Modifications in Zebrafish.
Methods Mol Biol. 2023;2637:313-324. doi: 10.1007/978-1-0716-3016-7_24.
4
Exosomal circ-CACNG2 promotes cardiomyocyte apoptosis in multiple myeloma via modulating miR-197-3p/caspase3 axis.
Exp Cell Res. 2022 Aug 15;417(2):113229. doi: 10.1016/j.yexcr.2022.113229. Epub 2022 May 29.
5
Epigenetics of Skeletal Muscle-Associated Genes in the , , , and Gene Families.
Epigenomes. 2020 Jan 30;4(1):1. doi: 10.3390/epigenomes4010001.
6
Ubiquinol-cytochrome c reductase core protein 1 contributes to cardiac tolerance to acute exhaustive exercise.
Exp Biol Med (Maywood). 2022 Jan;247(2):165-173. doi: 10.1177/15353702211046546. Epub 2021 Oct 14.
7
Direct-TRI: High-throughput RNA-extracting Method for All Stages of Zebrafish Development.
Bio Protoc. 2021 Sep 5;11(17):e4136. doi: 10.21769/BioProtoc.4136.
8
Developmental Angiogenesis Requires the Mitochondrial Phenylalanyl-tRNA Synthetase.
Front Cardiovasc Med. 2021 Sep 1;8:724846. doi: 10.3389/fcvm.2021.724846. eCollection 2021.
9
CRISPR-based genome editing of zebrafish.
Prog Mol Biol Transl Sci. 2021;180:69-84. doi: 10.1016/bs.pmbts.2021.01.005. Epub 2021 Mar 12.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验