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单细胞转录组学在听觉研究中的进展与应用。

Advance and Application of Single-cell Transcriptomics in Auditory Research.

机构信息

State Key Laboratory of Digital Medical Engineering, Department of Otolaryngology Head and Neck Surgery, Zhongda Hospital, School of Life Sciences and Technology, Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University, Nanjing, 210096, China.

Department of Psychiatry, Affiliated Hangzhou First People's Hospital, Zhejiang University school of Medicine, Hangzhou, 310030, China.

出版信息

Neurosci Bull. 2024 Jul;40(7):963-980. doi: 10.1007/s12264-023-01149-z. Epub 2023 Nov 28.

Abstract

Hearing loss and deafness, as a worldwide disability disease, have been troubling human beings. However, the auditory organ of the inner ear is highly heterogeneous and has a very limited number of cells, which are largely uncharacterized in depth. Recently, with the development and utilization of single-cell RNA sequencing (scRNA-seq), researchers have been able to unveil the complex and sophisticated biological mechanisms of various types of cells in the auditory organ at the single-cell level and address the challenges of cellular heterogeneity that are not resolved through by conventional bulk RNA sequencing (bulk RNA-seq). Herein, we reviewed the application of scRNA-seq technology in auditory research, with the aim of providing a reference for the development of auditory organs, the pathogenesis of hearing loss, and regenerative therapy. Prospects about spatial transcriptomic scRNA-seq, single-cell based genome, and Live-seq technology will also be discussed.

摘要

听力损失和耳聋作为一种全球性的残疾疾病,一直困扰着人类。然而,内耳的听觉器官高度不均一,细胞数量非常有限,在深度上还没有得到充分的描述。最近,随着单细胞 RNA 测序(scRNA-seq)的发展和利用,研究人员能够在单细胞水平上揭示听觉器官中各种类型细胞的复杂而精细的生物学机制,并解决传统批量 RNA 测序(bulk RNA-seq)无法解决的细胞异质性挑战。本文综述了 scRNA-seq 技术在听觉研究中的应用,以期为听觉器官的发育、听力损失的发病机制和再生治疗提供参考。还将讨论空间转录组 scRNA-seq、基于单细胞的基因组和 Live-seq 技术的前景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1ae7/11250760/7e65cc28fbef/12264_2023_1149_Fig1_HTML.jpg

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