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长非编码 RNA、剪接因子、可变剪接及其调控的关联。

The nexus of long noncoding RNAs, splicing factors, alternative splicing and their modulations.

机构信息

Department of Biomedical Science and Technology, School of Biological Sciences, Ramakrishna Mission Vivekananda Educational Research Institute (RKMVERI), Kolkata, India.

Department of Biosciences and Bioengineering, Indian Institute of Technology Dharwad, Dharwad, Karnataka, India.

出版信息

RNA Biol. 2024 Jan;21(1):1-20. doi: 10.1080/15476286.2023.2286099. Epub 2023 Nov 28.

Abstract

The process of alternative splicing (AS) is widely deregulated in a variety of cancers. Splicing is dependent upon splicing factors. Recently, several long noncoding RNAs (lncRNAs) have been shown to regulate AS by directly/indirectly interacting with splicing factors. This review focuses on the regulation of AS by lncRNAs through their interaction with splicing factors. AS mis-regulation caused by either mutation in splicing factors or deregulated expression of splicing factors and lncRNAs has been shown to be involved in cancer development and progression, making aberrant splicing, splicing factors and lncRNA suitable targets for cancer therapy. This review also addresses some of the current approaches used to target AS, splicing factors and lncRNAs. Finally, we discuss research challenges, some of the unanswered questions in the field and provide recommendations to advance understanding of the nexus of lncRNAs, AS and splicing factors in cancer.

摘要

选择性剪接(AS)过程在多种癌症中广泛失调。剪接依赖于剪接因子。最近,一些长链非编码 RNA(lncRNA)已被证明通过与剪接因子直接/间接相互作用来调节 AS。本综述重点介绍了 lncRNA 通过与剪接因子相互作用来调节 AS 的机制。由于剪接因子的突变或剪接因子和 lncRNA 的表达失调导致的 AS 失调已被证明与癌症的发生和发展有关,使异常剪接、剪接因子和 lncRNA 成为癌症治疗的合适靶点。本综述还讨论了目前用于靶向 AS、剪接因子和 lncRNA 的一些方法。最后,我们讨论了研究挑战、该领域的一些未解决问题,并提出了建议,以推进对 lncRNA、AS 和剪接因子在癌症中的关系的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b9f/10761143/a8d28bd97878/KRNB_A_2286099_F0001_OC.jpg

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