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丁醇胁迫下基因表达网络的重编程消除了菌丝发育。

Reprogramming in Gene Expression Network under Butanol Stress Abrogates Hyphal Development.

机构信息

Infectious Disease Laboratory, National Institute of Immunology, New Delhi 110067, India.

Next Generation Sequencing Facility, National Institute of Immunology, New Delhi 110067, India.

出版信息

Int J Mol Sci. 2023 Dec 7;24(24):17227. doi: 10.3390/ijms242417227.

Abstract

is the causative agent of invasive fungal infections. Its hyphae-forming ability is regarded as one of the important virulence factors. To unravel the impact of butanol on , it was placed in O complete human serum with butanol (1% /). The transcriptome under butanol stress was then identified by mRNA sequencing. Studies including electron microscopy demonstrated the inhibition of hyphae formation in under the influence of butanol, without any significant alteration in growth rate. The numbers of genes upregulated in the butanol in comparison to the serum alone were 1061 (20 min), 804 (45 min), and 537 (120 min). cells exhibited the downregulation of six hypha-specific transcription factors and the induction of four repressor/regulator genes. Many of the hypha-specific genes exhibited repression in the medium with butanol. The genes related to adhesion also exhibited repression, whereas, among the heat-shock genes, three showed inductions in the presence of butanol. The fungal-specific genes exhibited induction as well as repression in the butanol-treated cells. Furthermore, ten upregulated genes formed the core stress gene set in the presence of butanol. In the gene ontology analysis, enrichment of the processes related to non-coding RNA, ribosome biosynthesis, and metabolism was observed in the induced gene set. On the other side, a few GO biological process terms, including biofilm formation and filamentous growth, were enriched in the repressed gene set. Taken together, under butanol stress, is unable to extend hyphae and shows growth by budding. Many of the genes with perturbed expression may have fitness or virulence attributes and may provide prospective sites of antifungal targets against

摘要

是侵袭性真菌感染的病原体。其菌丝形成能力被认为是重要的毒力因素之一。为了阐明丁醇对 的影响,将其置于含丁醇(1%/)的 O 完全人血清中。然后通过 mRNA 测序鉴定丁醇胁迫下 的转录组。包括电子显微镜在内的研究表明,丁醇的存在抑制了 的菌丝形成,而生长速度没有任何明显变化。与单独使用血清相比,丁醇中上调的基因数量为 1061(20 分钟)、804(45 分钟)和 537(120 分钟)。 细胞下调了六个菌丝特异性转录因子,并诱导了四个阻遏/调节基因。许多菌丝特异性基因在含丁醇的培养基中受到抑制。与粘附相关的基因也表现出抑制,而在热休克基因中,有三个在存在丁醇的情况下被诱导。真菌特异性基因在丁醇处理的 细胞中表现出诱导和抑制。此外,十个上调基因在存在丁醇的情况下形成了核心应激基因集。在基因本体论分析中,在诱导基因集中观察到与非编码 RNA、核糖体生物合成和代谢相关的过程富集。另一方面,在受抑制基因集中,几个 GO 生物过程术语,包括生物膜形成和丝状生长,被富集。总之,在丁醇胁迫下, 无法延伸菌丝,通过出芽生长。许多表达失调的基因可能具有适应性或毒力属性,可能为针对 的抗真菌靶点提供有前景的位点

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9a91/10743114/3e253e16ba05/ijms-24-17227-g001.jpg

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