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环(L-或D-苯丙氨酸-L-脯氨酸-氨基环丙烷羧酸)和环(L-脯氨酸-L-或D-苯丙氨酸-氨基环丙烷羧酸)的构象。特定类型β-转角的环化二肽模型。

Conformations of cyclo(L-orD-Phe-L-Pro-Aca) and cyclo(L-Pro-L- or D-Phe-Aca). Cyclized dipeptide models for specific types of beta-bends.

作者信息

Mizuno H, Lee S, Nakamura H, Kodera Y, Kato T, Go N, Izumiya N

出版信息

Biophys Chem. 1986 Nov;25(1):73-90. doi: 10.1016/0301-4622(86)85068-2.

Abstract

Conformational analyses on four cyclic model peptides of the beta-bend, cyclo(L- or D-Phe-L-Pro-epsilon-aminocaproyl(Aca] and cyclo(L-Pro-L- or D-Phe-Aca), were carried out both experimentally and theoretically. Cyclo(D-Phe-L-Pro-Aca) was shown to exist as a single conformer taking the type II' beta-bend. The comparison of its CD spectra with those of cyclo(L-Ala-L-Ala-Aca) revealed that type I and II' beta-bends, both with alpha-helix-like CD spectra, can be distinguished. Cyclo(L-Phe-L-Pro-Aca) was shown to exist as a single conformer with a cis L-Phe-L-Pro peptide bond, taking the type VI beta-bend. Its CD spectrum has thus been observed for the first time for the bend containing a cis peptide bond. Cyclo(L-Pro-L-Phe-Aca) was shown to exist as a mixture of two conformers, the major one taking the type I beta-bend with a trans Aca-L-Pro peptide bond and the minor one with a cis Aca-L-Pro peptide bond. Cyclo(L-Pro-D-Phe-Aca) was suggested to exist as a mixture of two conformers, the major one taking the type II beta-bend with a trans Aca-L-Pro peptide bond and the minor one with a cis Aca-L-Pro peptide bond.

摘要

对四种β-转角环模型肽,即环(L-或D-苯丙氨酸-L-脯氨酸-ε-氨基己酰(Aca))和环(L-脯氨酸-L-或D-苯丙氨酸-Aca),进行了实验和理论构象分析。结果表明,环(D-苯丙氨酸-L-脯氨酸-Aca)以单一构象体形式存在,呈II'型β-转角。将其圆二色光谱与环(L-丙氨酸-L-丙氨酸-Aca)的光谱进行比较,发现I型和II'型β-转角,两者都具有类似α-螺旋的圆二色光谱,可以区分。环(L-苯丙氨酸-L-脯氨酸-Aca)以单一构象体形式存在,其L-苯丙氨酸-L-脯氨酸肽键为顺式,呈VI型β-转角。因此,首次观察到含有顺式肽键的转角的圆二色光谱。环(L-脯氨酸-L-苯丙氨酸-Aca)以两种构象体的混合物形式存在,主要构象体呈I型β-转角,Aca-L-脯氨酸肽键为反式,次要构象体的Aca-L-脯氨酸肽键为顺式。环(L-脯氨酸-D-苯丙氨酸-Aca)被认为以两种构象体的混合物形式存在,主要构象体呈II型β-转角,Aca-L-脯氨酸肽键为反式,次要构象体的Aca-L-脯氨酸肽键为顺式。

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