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调控衰老时糖基时钟的基因网络图谱绘制。

Mapping of the gene network that regulates glycan clock of ageing.

机构信息

Genos Glycoscience Research Laboratory, Zagreb, Croatia.

Department of Biology, Division of Molecular Biology, Faculty of Science, University of Zagreb, Zagreb, Croatia.

出版信息

Aging (Albany NY). 2023 Dec 26;15(24):14509-14552. doi: 10.18632/aging.205106.

DOI:10.18632/aging.205106
PMID:38149987
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10781487/
Abstract

Glycans are an essential structural component of immunoglobulin G (IgG) that modulate its structure and function. However, regulatory mechanisms behind this complex posttranslational modification are not well known. Previous genome-wide association studies (GWAS) identified 29 genomic regions involved in regulation of IgG glycosylation, but only a few were functionally validated. One of the key functional features of IgG glycosylation is the addition of galactose (galactosylation), a trait which was shown to be associated with ageing. We performed GWAS of IgG galactosylation (N=13,705) and identified 16 significantly associated loci, indicating that IgG galactosylation is regulated by a complex network of genes that extends beyond the galactosyltransferase enzyme that adds galactose to IgG glycans. Gene prioritization identified 37 candidate genes. Using a recently developed CRISPR/dCas9 system we manipulated gene expression of candidate genes in the IgG expression system. Upregulation of three genes, and , changed the IgG glycome composition, which confirmed that these three genes are involved in IgG galactosylation in this expression system.

摘要

糖基是免疫球蛋白 G(IgG)的重要结构组成部分,调节其结构和功能。然而,这种复杂的翻译后修饰的调节机制还不是很清楚。先前的全基因组关联研究(GWAS)确定了 29 个与 IgG 糖基化调节相关的基因组区域,但只有少数几个得到了功能验证。IgG 糖基化的一个关键功能特征是添加半乳糖(半乳糖基化),这一特征与衰老有关。我们对 IgG 半乳糖基化(N=13705)进行了 GWAS 研究,鉴定出 16 个与 IgG 半乳糖基化显著相关的位点,表明 IgG 半乳糖基化受一个复杂的基因网络调控,这个网络超越了向 IgG 聚糖添加半乳糖的半乳糖基转移酶。基因优先级确定了 37 个候选基因。使用最近开发的 CRISPR/dCas9 系统,我们在 IgG 表达系统中操纵候选基因的表达。三个基因(和)的上调改变了 IgG 聚糖组成,这证实了这三个基因在这个 IgG 表达系统中参与 IgG 半乳糖基化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c8e/10781487/b99d1fdaf62a/aging-15-205106-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c8e/10781487/5e66d039eb56/aging-15-205106-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c8e/10781487/2cae8715b24b/aging-15-205106-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c8e/10781487/b99d1fdaf62a/aging-15-205106-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c8e/10781487/5e66d039eb56/aging-15-205106-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c8e/10781487/2cae8715b24b/aging-15-205106-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c8e/10781487/b99d1fdaf62a/aging-15-205106-g003.jpg

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Biotechnol Adv. 2023 Oct;67:108169. doi: 10.1016/j.biotechadv.2023.108169. Epub 2023 May 18.
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Front Cell Dev Biol. 2022 Dec 22;10:982609. doi: 10.3389/fcell.2022.982609. eCollection 2022.
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The IgG glycome of SARS-CoV-2 infected individuals reflects disease course and severity.SARS-CoV-2 感染者的 IgG 聚糖组反映了疾病进程和严重程度。
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Front Immunol. 2022 Oct 18;13:993354. doi: 10.3389/fimmu.2022.993354. eCollection 2022.
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Immunoglobulin G N-Glycosylation Signatures in Incident Type 2 Diabetes and Cardiovascular Disease.免疫球蛋白 G N-糖基化特征与 2 型糖尿病及心血管疾病的发生。
Diabetes Care. 2022 Nov 1;45(11):2729-2736. doi: 10.2337/dc22-0833.
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