Nordic Bioscience, Biomarkers and Research, Hovedgade 205-207, 2730, Herlev, Denmark.
Sci Rep. 2023 Dec 27;13(1):23039. doi: 10.1038/s41598-023-50313-y.
Citrullinated vimentin has been linked to several chronic and autoimmune diseases, but how citrullinated vimentin is associated with disease prevalence and genetic variants in a clinical setting remains unknown. The aim of this study was to obtain a better understanding of the genetic variants and pathologies associated with citrullinated and MMP-degraded vimentin. Patient Registry data, serum samples and genotypes were collected for a total of 4369 Danish post-menopausal women enrolled in the Prospective Epidemiologic and Risk Factor study (PERF). Circulating citrullinated and MMP-degraded vimentin (VICM) was measured. Genome-wide association studies (GWAS) and phenome wide association studies (PheWAS) with levels of VICM were performed. High levels of VICM were significantly associated with the prevalence of chronic pulmonary diseases and death from respiratory and cardiovascular diseases (CVD). GWAS identified 33 single nucleotide polymorphisms (SNPs) with a significant association with VICM. These variants were in the peptidylarginine deiminase 3/4 (PADI3/PADI4) and Complement Factor H (CFH)/KCNT2 gene loci on chromosome 1. Serum levels of VICM, a marker of citrullinated and MMP-degraded vimentin, were associated with chronic pulmonary diseases and genetic variance in PADI3/PADI4 and CFH/ KCNT2. This points to the potential for VICM to be used as an activity marker of both citrullination and inflammation, identifying responders to targeted treatment and patients likely to experience disease progression.
瓜氨酸化波形蛋白与几种慢性和自身免疫性疾病有关,但在临床环境中,瓜氨酸化波形蛋白与疾病患病率和遗传变异的关联尚不清楚。本研究旨在更好地了解与瓜氨酸化和 MMP 降解的波形蛋白相关的遗传变异和病理学。共收集了 4369 名丹麦绝经后妇女的患者登记数据、血清样本和基因型,这些妇女参加了前瞻性流行病学和风险因素研究(PERF)。测量了循环瓜氨酸化和 MMP 降解的波形蛋白(VICM)。进行了全基因组关联研究(GWAS)和表型全基因组关联研究(PheWAS),以研究 VICM 水平。高水平的 VICM 与慢性肺部疾病以及呼吸系统和心血管疾病(CVD)导致的死亡的患病率显著相关。GWAS 确定了 33 个与 VICM 显著相关的单核苷酸多态性(SNP)。这些变体位于 1 号染色体上的肽基精氨酸脱亚氨酶 3/4(PADI3/PADI4)和补体因子 H(CFH)/KCNT2 基因座。VICM 是瓜氨酸化和 MMP 降解的波形蛋白的标志物,其血清水平与慢性肺部疾病以及 PADI3/PADI4 和 CFH/KCNT2 中的遗传变异有关。这表明 VICM 有可能作为瓜氨酸化和炎症的活性标志物,识别出对靶向治疗有反应的患者和可能经历疾病进展的患者。