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瑞士西部的色素性视网膜炎和其他遗传性视网膜疾病的遗传学研究

Genetics of Retinitis Pigmentosa and Other Hereditary Retinal Disorders in Western Switzerland.

机构信息

Genetic Ophthalmic Department, Hôpital Ophtalmique Jules-Gonin, University of Lausanne and Faculty of Life Sciences, Lausanne, Switzerland,

Institut d'ophtalmologie de Vevey (INOV), Vevey, Switzerland,

出版信息

Ophthalmic Res. 2024;67(1):172-182. doi: 10.1159/000536036. Epub 2023 Dec 29.

Abstract

INTRODUCTION

Mutational screening of inherited retinal disorders is prerequisite for gene targeted therapy. Our aim was to report and analyze the proportions of mutations in inherited retinal disease (IRD)-causing genes from a single center in Switzerland in order to describe the distribution of IRDs in Western Switzerland.

METHODS

We conducted a retrospective study of patient records. Criteria for inclusion were residence in Western Switzerland for patients and relatives presenting a clinical diagnosis of IRDs and an established molecular diagnosis managed by the genetics service of the Jules-Gonin Eye Hospital (JGEH) of Lausanne between January 2002 and December 2022. We initially investigated the IRD phenotypes in all patients (full cohort) with a clinical diagnosis, then calculated the distribution of IRD gene mutations in the entire cohort (genetically determined cohort). We analyzed a sub-group that comprised pediatric patients (≤18 years of age). In addition, we calculated the distribution of gene mutations within the most represented IRDs. Comprehensive gene screening was performed using a combined approach of different generation of DNA microarray analysis, direct sequencing, and Sanger sequencing.

RESULTS

The full cohort comprised 899 individuals from 690 families with a clinical diagnosis of IRDs. We identified 400 individuals from 285 families with an elucidated molecular diagnosis (variants in 84 genes) in the genetically determined cohort. The pediatric cohort included 89 individuals from 65 families with an elucidated molecular diagnosis. The molecular diagnosis rate for the genetically determined cohort was 58.2% (family ratio) and the 5 most frequently implicated genes per family were ABCA4 (11.6%), USH2A (7.4%), EYS (6.7%), PRPH2 (6.3%), and BEST1 (4.6%). The pediatric cohort had a family molecular diagnosis rate of 64.4% and the 5 most common mutated genes per family were RS1 (9.2%), ABCA4 (7.7%), CNGB3 (7.7%), CACNA1F (6.2%), CEP290 (4.6%).

CONCLUSIONS

This study describes the genetic mutation landscape of IRDs in Western Switzerland in order to quantify their disease burden and contribute to a better orientation of the development of future gene targeted therapies.

摘要

简介

遗传性视网膜疾病的突变筛查是基因靶向治疗的前提。我们的目的是报告和分析来自瑞士单一中心的遗传性视网膜疾病(IRD)致病基因的突变比例,以便描述瑞士西部的 IRD 分布情况。

方法

我们对患者的病历进行了回顾性研究。纳入标准为患者及其亲属居住在瑞士西部,临床诊断为 IRD,并于 2002 年 1 月至 2022 年 12 月期间由洛桑 Jules-Gonin 眼科医院(JGEH)的遗传科管理,建立了分子诊断。我们首先对所有有临床诊断的患者(全队列)的 IRD 表型进行了研究,然后计算了整个队列(遗传确定队列)中 IRD 基因突变的分布情况。我们分析了一个包含儿科患者(≤18 岁)的亚组。此外,我们还计算了最常见的 IRD 内基因突变的分布。采用不同代 DNA 微阵列分析、直接测序和 Sanger 测序相结合的综合方法进行全面基因筛查。

结果

全队列包括 690 个有 IRD 临床诊断的家族中的 899 名个体。我们在遗传确定队列中鉴定出 285 个家族的 400 名个体具有明确的分子诊断(84 个基因中的变异)。儿科队列包括 65 个家族的 89 名个体,具有明确的分子诊断。遗传确定队列的分子诊断率为 58.2%(家族比例),每个家族最常涉及的 5 个基因是 ABCA4(11.6%)、USH2A(7.4%)、EYS(6.7%)、PRPH2(6.3%)和 BEST1(4.6%)。儿科队列的家族分子诊断率为 64.4%,每个家族最常见的 5 个突变基因是 RS1(9.2%)、ABCA4(7.7%)、CNGB3(7.7%)、CACNA1F(6.2%)和 CEP290(4.6%)。

结论

本研究描述了瑞士西部 IRD 的遗传突变图谱,以量化其疾病负担,并有助于更好地指导未来基因靶向治疗的发展。

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