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单脒丙啶聚合酶链式反应(Propidium monoazide PCR),一种检测未受损的疱疹病毒 1 型(OsHV-1)衣壳的方法,并可估算病毒半数致死量 50。

Propidium monoazide PCR, a method to determine OsHV-1 undamaged capsids and to estimate virus Lethal Dose 50.

机构信息

Département Ressources Biologiques et Environnement, Ifremer, Nantes, France.

ASIM, Adaptation Santé des Invertébrés, Ifremer, La Tremblade, France.

出版信息

Virus Res. 2024 Feb;340:199307. doi: 10.1016/j.virusres.2023.199307. Epub 2024 Jan 4.

Abstract

Ostreid herpes virus 1 (OsHV-1) has been classified within the Malacoherpesviridae family from the Herpesvirales order. OsHV-1 is the etiological agent of a contagious viral disease of Pacific oysters, C. gigas, affecting also other bivalve species. Mortality rates reported associated with the viral infection vary considerably between sites and countries and depend on the age of affected stocks. A variant called μVar has been reported since 2008 in Europe and other variants in Australia and in New Zealand last decade. These variants are considered as the main causative agents of mass mortality events affecting C. gigas. Presently there is no established cell line that allows for the detection of infectious OsHV-1. In this context, a technique of propidium monoazide (PMA) PCR was developed in order to quantify "undamaged" capsids. This methodology is of interest to explore the virus infectivity. Being able to quantify viral particles getting an undamaged capsid (not only an amount of viral DNA) in tissue homogenates prepared from infected oysters or in seawater samples can assist in the definition of a Lethal Dose (LD) 50 and gain information in the experiments conducted to reproduce the viral infection. The main objectives of the present study were (i) the development/optimization of a PMA PCR technique for OsHV-1 detection using the best quantity of PMA and verifying its effectiveness through heat treatment, (ii) the definition of the percentage of undamaged capsids in four different tissue homogenates prepared from infected Pacific oysters and (iii) the approach of a LD50 during experimental viral infection assays on the basis of a number of undamaged capsids. Although the developped PMA PCR technique was unable to determine OsHV-1 infectivity in viral supensions, it could greatly improve interpretation of virus positive results obtained by qPCR. This technique is not intended to replace the quantification of viral DNA by qPCR, but it does make it possible to give a form of biological meaning to the detection of this DNA.

摘要

牡蛎疱疹病毒 1(OsHV-1)已被归类为疱疹病毒目下的 Malacoherpesviridae 科。OsHV-1 是太平洋牡蛎传染性病毒病的病原体,也会影响其他双壳类物种。据报道,与病毒感染相关的死亡率在不同地点和国家之间差异很大,并且取决于受感染种群的年龄。自 2008 年以来,欧洲报告了一种称为 μVar 的变体,而过去十年中,澳大利亚和新西兰也报告了其他变体。这些变体被认为是导致影响太平洋牡蛎大规模死亡事件的主要病原体。目前,没有建立允许检测传染性 OsHV-1 的细胞系。在这种情况下,开发了一种卟啉单甲醚(PMA)PCR 技术,以定量“未损坏”衣壳。这种方法对于探索病毒感染力很有意义。能够定量从感染牡蛎或海水样本中制备的组织匀浆中获得未损坏衣壳的病毒颗粒(不仅是病毒 DNA 的量),可以辅助确定半数致死剂量(LD)50,并在用于复制病毒感染的实验中获取信息。本研究的主要目的是:(i)使用最佳量的 PMA 开发/优化用于检测 OsHV-1 的 PMA PCR 技术,并通过热处理验证其有效性,(ii)定义从感染的太平洋牡蛎制备的四种不同组织匀浆中未损坏衣壳的百分比,以及(iii)根据未损坏衣壳的数量,在实验性病毒感染测定中接近 LD50。尽管开发的 PMA PCR 技术无法确定病毒悬浮液中的 OsHV-1 感染力,但它可以大大改善 qPCR 检测病毒阳性结果的解释。该技术不是要替代 qPCR 对病毒 DNA 的定量,而是使对这种 DNA 的检测具有某种生物学意义成为可能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebc6/10800765/74e5f8949a45/gr1.jpg

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