Department of Immunology, NHC Key Laboratory of Medical Immunology (Peking University), School of Basic Medical Sciences, Peking University Health Science Center, Beijing, China; Peking University Center for Human Disease Genomics, Beijing, China.
Department of Immunology, NHC Key Laboratory of Medical Immunology (Peking University), School of Basic Medical Sciences, Peking University Health Science Center, Beijing, China; Peking University Center for Human Disease Genomics, Beijing, China.
Genomics. 2024 Jan;116(1):110774. doi: 10.1016/j.ygeno.2023.110774. Epub 2023 Dec 30.
Human VSTM1 (also known as SIRL1) is an inhibitory immune checkpoint receptor involved in leukocyte activation. Identification of the homologous genes in other species, such as mice and rats, will undoubtedly contribute to functional studies and clinical applications. Here, we successfully cloned the Vstm1 gene in rats, as supported by high-throughput sequencing data. However, Vstm1 is degenerated to a pseudogene in the mouse genome. Rat Vstm1 mRNA contains a complete open reading frame (ORF) of 630 nucleotides encoding 209 amino acids. Rat Vstm1 is highly expressed in bone marrow, especially in granulocytes. The expression levels of Vstm1 gradually increase with the development of granulocytes in bone marrow but are downregulated in response to inflammatory stimuli. Rat VSTM1 does not have an immunoreceptor tyrosine-based inhibitory motif (ITIM), however, it shows a conservative function of inflammatory inhibition with human VSTM1, and both are anti-correlated with many inflammatory cytokines, such as IL-1α and TNF-α. In bone marrow-derived macrophages (BMDMs), either rat or human VSTM1 suppressed the secretion of inflammatory cytokines in response to LPS stimulation. Further analysis in lung cancer microenvironment revealed that VSTM1 is mainly expressed in myeloid cells, anti-correlated with inflammatory cytokines and associated with tumor development and metastasis.
人类 VSTM1(也称为 SIRL1)是一种参与白细胞激活的抑制性免疫检查点受体。鉴定其他物种(如小鼠和大鼠)中的同源基因,无疑将有助于功能研究和临床应用。在这里,我们成功地在大鼠中克隆了 Vstm1 基因,这得到了高通量测序数据的支持。然而,Vstm1 在小鼠基因组中退化 为一个假基因。大鼠 Vstm1 mRNA 包含一个完整的 630 个核苷酸的开放阅读框(ORF),编码 209 个氨基酸。大鼠 Vstm1 在骨髓中高度表达,特别是在粒细胞中。Vstm1 的表达水平随着骨髓中粒细胞的发育逐渐增加,但在炎症刺激下下调。大鼠 VSTM1 没有免疫受体酪氨酸基抑制基序(ITIM),然而,它与人类 VSTM1 表现出保守的炎症抑制功能,与许多炎症细胞因子(如 IL-1α 和 TNF-α)呈负相关。在骨髓来源的巨噬细胞(BMDMs)中,大鼠或人类 VSTM1 均可抑制 LPS 刺激引起的炎症细胞因子的分泌。在肺癌微环境中的进一步分析表明,VSTM1 主要在髓样细胞中表达,与炎症细胞因子呈负相关,与肿瘤的发生和转移有关。