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荧光原位杂交在筛查 NRG1 基因重排方面存在局限性。

Fluorescent in situ hybridization has limitations in screening NRG1 gene rearrangements.

机构信息

Department of Pathology, Nanjing Jiangning Hospital, Nanjing, 211100, Jiangsu Province, China.

Department of Pathology, The Affiliated Drum Tower Hospital of Medical School,Nanjing University, Nanjing, 210008, Jiangsu Province, China.

出版信息

Diagn Pathol. 2024 Jan 3;19(1):1. doi: 10.1186/s13000-023-01424-7.

Abstract

BACKGROUND

NRG1 fusion is a promising therapeutic target for various tumors but its prevalence is extremely low, and there are no standardized testing algorithms for genetic assessment.

MOTHODS

In this study, we analyzed 3008 tumors using Fluorescence in situ hybridization (FISH) and immunohistochemistry (IHC) to screen for NRG1 translocation and p-HER3 expression.

RESULTS

Our results demonstrated no cases with p-HER3 positivity through IHC. Nonetheless, 29 cases (0.96%) were identified positive for NRG1 translocation through FISH, with three different signal types. FISH-positive cases were subsequently subjected to next-generation sequencing (NGS) testing. However, only eight of these cases were confirmed with NRG1 fusion through NGS. Notably, we divided FISH into three types and FISH type C group was consistent with NGS results. All NGS NRG1 fusion tumors were adenocarcinomas, with a higher prevalence in females. Our findings indicate that although FISH has limitations in screening NRG1 gene rearrangements, NRG1 fusions can be reliably detected with signals exhibiting low copy numbers of the 5'-end of the gene and no fusion signals.

CONCLUSION

Considering the high cost of NGS, FISH remains a useful method for screening NRG1 fusions in various types of tumors. This study provides valuable insights into the molecular mechanisms of NRG1 fusion and identifies potential treatment targets for patients suffering from this disease.

摘要

背景

NRG1 融合是多种肿瘤有前途的治疗靶点,但它的流行率极低,并且没有用于遗传评估的标准化测试算法。

方法

在这项研究中,我们使用荧光原位杂交(FISH)和免疫组织化学(IHC)分析了 3008 个肿瘤,以筛选 NRG1 易位和 p-HER3 表达。

结果

我们的结果表明,IHC 中没有 p-HER3 阳性病例。尽管如此,通过 FISH 鉴定出 29 例(0.96%)NRG1 易位阳性,具有三种不同的信号类型。FISH 阳性病例随后进行下一代测序(NGS)测试。然而,只有其中 8 例通过 NGS 证实存在 NRG1 融合。值得注意的是,我们将 FISH 分为三种类型,FISH 类型 C 组与 NGS 结果一致。所有 NGS NRG1 融合肿瘤均为腺癌,女性患病率较高。我们的研究结果表明,尽管 FISH 在筛选 NRG1 基因重排方面存在局限性,但可以通过基因 5'端低拷贝数和无融合信号的信号可靠地检测到 NRG1 融合。

结论

考虑到 NGS 的高成本,FISH 仍然是筛选各种类型肿瘤中 NRG1 融合的有用方法。本研究为 NRG1 融合的分子机制提供了有价值的见解,并确定了患有这种疾病的患者的潜在治疗靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf50/10762970/afab7faaa64f/13000_2023_1424_Fig1_HTML.jpg

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