Jencks D A, Mathews R G
J Biol Chem. 1987 Feb 25;262(6):2485-93.
In this paper we report on the allosteric regulation of the dimeric flavoprotein methylenetetrahydrofolate reductase (E.C. 1.5.1.20) by the inhibitor, AdoMet, and by one of the substrates, NADPH. These metabolites play antagonistic roles in this regulation, with NADPH recruiting active forms of the enzyme and AdoMet recruiting inactive forms. At high NADPH concentrations, activity dependence on AdoMet is sigmoidal, indicating cooperativity. The kinetics of inhibition induced by AdoMet are slow enough to be studied by conventional methods and exhibit marked biphasicity. Both the extents and rates of these phases are again affected antagonistically by the ligands, AdoMet increasing the extent of the faster phase, and NADPH decreasing the extent of the faster phase and the rate of the slower phase. We present a model consistent with these observations. Our model postulates two states of the enzyme, R and T. NADPH and AdoMet exhibit antagonistic binding to a given subunit, so that occupancy by one ligand decreases or abolishes affinity for the other ligand. However, within a given state, the subunits do not interact with each other, so the ligation of one does not affect the affinities of its neighbor. R-T transitions occur between all similarly ligated states. The ligands have different affinities for the R and T states, and AdoMet binding to a given subunit is measurably slow. This model predicts the observed features of the equilibrium and kinetic data noted above. We also present a system for simulation of reaction schemes in which each step is pseudo first order that is fast and versatile enough to allow least squares fitting of microscopic rate constants to kinetic data.
在本文中,我们报告了抑制剂腺苷甲硫氨酸(AdoMet)和底物之一烟酰胺腺嘌呤二核苷酸磷酸(NADPH)对二聚体黄素蛋白亚甲基四氢叶酸还原酶(E.C. 1.5.1.20)的变构调节作用。这些代谢物在这种调节中发挥拮抗作用,NADPH促使酶的活性形式产生,而AdoMet促使非活性形式产生。在高NADPH浓度下,酶活性对AdoMet的依赖性呈S形,表明存在协同性。AdoMet诱导的抑制动力学足够缓慢,可用传统方法进行研究,并且呈现出明显的双相性。这两个阶段的程度和速率再次受到配体的拮抗影响,AdoMet增加较快阶段的程度,而NADPH降低较快阶段的程度以及较慢阶段的速率。我们提出了一个与这些观察结果一致的模型。我们的模型假定酶存在两种状态,R和T。NADPH和AdoMet对给定亚基表现出拮抗结合,因此一个配体的占据会降低或消除对另一个配体的亲和力。然而,在给定状态下,亚基之间不相互作用,所以一个亚基的结合不会影响其相邻亚基的亲和力。R - T转变发生在所有类似结合的状态之间。配体对R和T状态具有不同的亲和力,并且AdoMet与给定亚基的结合明显缓慢。该模型预测了上述平衡和动力学数据的观测特征。我们还提出了一个用于模拟反应方案的系统,其中每个步骤都是准一级的,速度足够快且通用性强,能够对微观速率常数进行最小二乘法拟合以获得动力学数据。