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美国关于感染仙人球()的鼠尾仙人掌坏死相关病毒的首次报道。

First Report of rattail cactus necrosis-associated virus Infecting Prickly pear () in the United States.

作者信息

Murcia Bermudez Johan Manuel, Singh Neeraja, Chamberland Michael, Poudel-Ward Bindu

机构信息

Yuma County Cooperative Extension, 6425 W 8th St, Yuma, Arizona, United States, 85364;

Yuma County Cooperative Extension, University of Arizona, 6425 W 8th Street, Yuma, AZ, 85364, Yuma, Arizona, United States, 85364;

出版信息

Plant Dis. 2024 Jan 8. doi: 10.1094/PDIS-07-23-1344-PDN.

Abstract

Black-spined prickly pear (Opuntia macrocentra Engelmann; Cactaceae) is a cactus native to Arizona, New Mexico, Texas, and northwest Mexico. The plant is often grown for ornamental purposes in the United States. In February 2023, virus-like symptoms such as concentric ringspots and chlorotic spots were observed on O. macrocentra plants grown at the vicinity of Maricopa County Cooperative extension, University of Arizona, Phoenix, AZ (33°24'24.6"N, 111°59'15.3"W). Total RNA was extracted from two samples (YPHC-60-A and YPHC-60-B), following the protocol by Tzanetakis et al. (2007). Reverse transcription polymerase chain reaction (RT-PCR) was performed with degenerate tobamovirus, TobamodF/TobamodR (Li et al. 2018) and potexvirus, 1RC, Potex 2RC, and Potex 5 (van der Vlugt and Berendsen 2002) primers. An expected amplicon of 880 bp was obtained from both samples using TobamodF/TobamodR primers, while no amplification was observed with potexvirus primers. Further, RT-PCR was carried out using species-specific primers to detect cacti related tobamoviruses: cactus mild mottle virus (CMMoV), rattail cactus necrosis-associated virus (RCNaV) (Park et al. 2018) and Opuntia virus 2 (Salgado-Ortiz et al. 2020). Amplicons of ~540 bp were amplified from both samples using RCNaV specific primers, whereas no amplification was obtained using CMMoV and Opuntia virus 2 specific primers. Then, the amplicons from both YPHC-60 (A-B) isolates (540 bp) were Sanger sequenced and shared 99.22% nucleotide identity to each other. A BLAST search revealed 93% nucleotide identity with RCNaV CP sequences (KY581586.1, JF729471, and MT130378.1). The sequences were submitted in the GenBank (accessions no. OQ914798 and OR828526). Furthermore, complete RCNaV- RNA dependent RNA polymerase (RdRP) gene was amplified using primers 3490-s-5'GTAGGTGGTACCGCATAGCA-3'; 3490as 5'AAACGCAAGTCMRYGACYGA-3' (designed in this study from accession no. JF729471.1, position 3490-3509 and 4905-4925). The expected amplicons of ~1,500 bp were obtained from both YPHC-60 (A-B) samples and sequenced (GenBank: OQ914799 and OR823954) showing 87.5 % identity with RCNaV sequences (JF729471.1 and NC_016442.1). The maximum-likelihood phylogenetic tree clustered YPHC-60 (A-B) isolates in a single clade with other RCNaV isolates. RCNaV virus particles were isolated from YPHC-60 (A-B) and submitted for RNA extraction, testing positive for RCNaV by RT-PCR. Sap extract of YPHC-60 (A-B) prepared in 0.01 M phosphate buffer (pH =7.0) was used to mechanically inoculate 3 indicator plant species (n=10): Phaseolus vulgaris, Medicago sativa, and Cucumis melo. Also, infected tissue was used to graft Opuntia sp. plants. Symptoms such as local lesions were observed on M. sativa and vein thickening on P. vulgaris 14 days post-inoculation, while Opuntia sp. showed chlorosis 30 days after grafting. RCNaV infection in mechanically inoculated P. vulgaris, M. sativa, and Opuntia sp. was also confirmed through RT-PCR. C. melo and non-inoculated control plants did not show any symptoms, nor tested positive through RT-PCR. RCNaV has been reported earlier to infect cactus species in South Korea (Park et al. 2018) and O. albicarpa in Mexico (De La Torre-Almaráz et al. 2016), where it was found in several orchards. To the best of our knowledge, this is the first report of RCNaV infecting O. macrocentra in the United States. This study highlights that RCNaV is easily transmitted mechanically or by grafting, which could impact the nursery industry as most cacti are clonally propagated.

摘要

黑刺梨(Opuntia macrocentra Engelmann;仙人掌科)是一种原产于亚利桑那州、新墨西哥州、得克萨斯州和墨西哥西北部的仙人掌。该植物在美国常被用于观赏种植。2023年2月,在亚利桑那大学凤凰城分校马里科帕县合作推广中心附近种植的大果仙人掌(Opuntia macrocentra)植株上观察到了同心环斑和褪绿斑等类病毒症状(北纬33°24′24.6″,西经111°59′15.3″)。按照Tzanetakis等人(2007年)的方案,从两个样本(YPHC - 60 - A和YPHC - 60 - B)中提取了总RNA。使用简并烟草花叶病毒引物TobamodF/TobamodR(Li等人,2018年)以及马铃薯X病毒引物1RC、Potex 2RC和Potex 5(van der Vlugt和Berendsen,2002年)进行逆转录聚合酶链反应(RT - PCR)。使用TobamodF/TobamodR引物从两个样本中均获得了约880 bp的预期扩增产物,而使用马铃薯X病毒引物未观察到扩增。此外,使用种特异性引物进行RT - PCR以检测仙人掌相关的烟草花叶病毒:仙人掌轻度斑驳病毒(CMMoV)、鼠尾仙人掌坏死相关病毒(RCNaV)(Park等人,2018年)和仙人掌病毒2(Salgado - Ortiz等人,2020年)。使用RCNaV特异性引物从两个样本中均扩增出了约540 bp的扩增产物,而使用CMMoV和仙人掌病毒2特异性引物未获得扩增产物。然后,对来自YPHC - 60(A - B)分离株的扩增产物(约540 bp)进行Sanger测序,发现它们彼此之间具有99.22%的核苷酸同一性。BLAST搜索显示与RCNaV CP序列(KY581586.1、JF729471和MT130378.1)具有93%的核苷酸同一性。这些序列已提交至GenBank(登录号为OQ914798和OR828526)。此外,使用引物3490 - s - 5'GTAGGTGGTACCGCATAGCA - 3';3490as 5'AAACGCAAGTCMRYGACYGA - 3'(本研究根据登录号JF729471.1设计,位置为3490 - 3509和4905 - 4925)扩增出了完整的RCNaV - RNA依赖RNA聚合酶(RdRP)基因。从YPHC - 60(A - B)的两个样本中均获得了约1500 bp的预期扩增产物并进行了测序(GenBank:OQ914799和OR823954),显示与RCNaV序列(JF729471.1和NC_016442.1)具有87.5%的同一性。最大似然系统发育树将YPHC - 60(A - B)分离株与其他RCNaV分离株聚类在一个单一的分支中。从YPHC - 60(A - B)中分离出了RCNaV病毒颗粒并提交进行RNA提取,通过RT-PCR检测RCNaV呈阳性。用0.01 M磷酸盐缓冲液(pH = 7.0)制备的YPHC - 60(A - B)汁液提取物用于机械接种3种指示植物(n = 10):菜豆、紫花苜蓿和甜瓜。此外,感染组织用于嫁接仙人掌属植物。接种后14天,在紫花苜蓿上观察到局部病斑等症状,在菜豆上观察到叶脉增厚,而仙人掌属植物在嫁接后30天出现褪绿症状。通过RT-PCR也证实了菜豆、紫花苜蓿和仙人掌属植物在机械接种后感染了RCNaV。甜瓜和未接种的对照植物未出现任何症状,通过RT-PCR检测也未呈阳性。此前已有报道称RCNaV在韩国感染仙人掌物种(Park等人,2018年)以及在墨西哥感染白果仙人掌(O. albicarpa)(De La Torre - Almaráz等人,2016年),在墨西哥的几个果园中发现了该病毒。据我们所知,这是RCNaV在美国感染大果仙人掌的首次报道。本研究强调RCNaV很容易通过机械传播或嫁接传播,这可能会影响苗圃产业,因为大多数仙人掌是通过无性繁殖的。

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