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解析染色质泛素化:化学生物学视角

Decoding Chromatin Ubiquitylation: A Chemical Biology Perspective.

作者信息

Franz Pauline, Fierz Beat

机构信息

Laboratory of Biophysical Chemistry of Macromolecules, Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland.

Laboratory of Biophysical Chemistry of Macromolecules, Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland.

出版信息

J Mol Biol. 2024 Apr 1;436(7):168442. doi: 10.1016/j.jmb.2024.168442. Epub 2024 Jan 9.

DOI:10.1016/j.jmb.2024.168442
PMID:38211893
Abstract

Since Strahl and Allis proposed the "language of covalent histone modifications", a host of experimental studies have shed light on the different facets of chromatin regulation by epigenetic mechanisms. Initially proposed as a concept for controlling gene transcription, the regulation of deposition and removal of histone post-translational modifications (PTMs), such as acetylation, methylation, and phosphorylation, have been implicated in many chromatin regulation pathways. However, large PTMs such as ubiquitylation challenge research on many levels due to their chemical complexity. In recent years, chemical tools have been developed to generate chromatin in defined ubiquitylation states in vitro. Chemical biology approaches are now used to link specific histone ubiquitylation marks with downstream chromatin regulation events on the molecular level. Here, we want to highlight how chemical biology approaches have empowered the mechanistic study of chromatin ubiquitylation in the context of gene regulation and DNA repair with attention to future challenges.

摘要

自从施特拉尔(Strahl)和阿利斯(Allis)提出“共价组蛋白修饰的语言”以来,大量实验研究揭示了表观遗传机制对染色质调控的不同方面。最初作为控制基因转录的一个概念提出,组蛋白翻译后修饰(PTM)如乙酰化、甲基化和磷酸化的沉积和去除调控,已涉及许多染色质调控途径。然而,诸如泛素化等大型PTM因其化学复杂性在多个层面上给研究带来挑战。近年来,已开发出化学工具以在体外产生处于特定泛素化状态的染色质。化学生物学方法现正用于在分子水平上将特定组蛋白泛素化标记与下游染色质调控事件联系起来。在此,我们想强调化学生物学方法如何在关注未来挑战的情况下,在基因调控和DNA修复背景下推动了对染色质泛素化的机制研究。

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