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果蝇科中基因家族和 的解耦进化。

Decoupled evolution of the gene family and in Drosophilidae.

机构信息

Department of Evolution and Ecology, University of California, Davis, CA 95616.

Department of Biology, Stanford University, Stanford, CA 94305.

出版信息

Proc Natl Acad Sci U S A. 2024 Jan 16;121(3):e2312380120. doi: 10.1073/pnas.2312380120. Epub 2024 Jan 12.

Abstract

Across internally fertilising species, males transfer ejaculate proteins that trigger wide-ranging changes in female behaviour and physiology. Much theory has been developed to explore the drivers of ejaculate protein evolution. The accelerating availability of high-quality genomes now allows us to test how these proteins are evolving at fine taxonomic scales. Here, we use genomes from 264 species to chart the evolutionary history of Sex Peptide (SP), a potent regulator of female post-mating responses in . We infer that first evolved in the subfamily and has since followed markedly different evolutionary trajectories in different lineages. Outside of the -, exists largely as a single-copy gene with independent losses in several lineages. Within the - the gene family has repeatedly and independently expanded. Up to seven copies, collectively displaying extensive sequence variation, are present in some species. Despite these changes, expression remains restricted to the male reproductive tract. Alongside, we document considerable interspecific variation in the presence and morphology of seminal microcarriers that, despite the critical role SP plays in microcarrier assembly in , appears to be independent of changes in the presence/absence or sequence of SP. We end by providing evidence that 's evolution is decoupled from that of its receptor, , in which we detect no evidence of correlated diversifying selection. Collectively, our work describes the divergent evolutionary trajectories that a novel gene has taken following its origin and finds a surprisingly weak coevolutionary signal between a supposedly sexually antagonistic protein and its receptor.

摘要

在有性生殖的物种中,雄性会传递精液蛋白,这些蛋白会引发雌性行为和生理的广泛变化。人们已经提出了许多理论来探讨精液蛋白进化的驱动因素。现在,高质量基因组的加速可用性使我们能够在精细的分类尺度上测试这些蛋白质是如何进化的。在这里,我们使用来自 264 个物种的基因组来绘制性肽 (SP) 的进化历史,SP 是调节 的雌性交配后反应的一种有力调节剂。我们推断,SP 首先在 亚科中进化,此后在不同的谱系中遵循明显不同的进化轨迹。在 - 之外,SP 主要作为一个单拷贝基因存在,在几个谱系中独立丢失。在 - 中, 基因家族已经反复独立扩展。多达七个拷贝,共同显示出广泛的序列变异,存在于一些物种中。尽管发生了这些变化,但 表达仍然局限于雄性生殖道。与此同时,我们记录了大量的种间差异,存在和形态的精液微载体,尽管 SP 在 微载体组装中起着关键作用,但似乎与 SP 的存在/缺失或序列的变化无关。最后,我们提供的证据表明, 的进化与其受体 的进化是脱钩的,我们在其中没有检测到相关性的分歧选择证据。总的来说,我们的工作描述了一个新基因在起源后所采取的不同进化轨迹,并发现了一种令人惊讶的弱协同进化信号,即一种假定的性拮抗蛋白与其受体之间的协同进化信号。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972b/10801855/8b8057558ba4/pnas.2312380120fig01.jpg

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