Weyer Henrik, Brauns Fridtjof, Frey Erwin
Arnold Sommerfeld Center for Theoretical Physics and Center for NanoScience, Department of Physics, Ludwig-Maximilians-Universität München, Theresienstraße 37, D-80333 München, Germany.
Max Planck School Matter to Life, Hofgartenstraße 8, D-80539 Munich, Germany.
Phys Rev E. 2023 Dec;108(6-1):064202. doi: 10.1103/PhysRevE.108.064202.
Intracellular protein patterns are described by (nearly) mass-conserving reaction-diffusion systems. While these patterns initially form out of a homogeneous steady state due to the well-understood Turing instability, no general theory exists for the dynamics of fully nonlinear patterns. We develop a unifying theory for nonlinear wavelength-selection dynamics in (nearly) mass-conserving two-component reaction-diffusion systems independent of the specific mathematical model chosen. Previous work has shown that these systems support an extremely broad band of stable wavelengths, but the mechanism by which a specific wavelength is selected has remained unclear. We show that an interrupted coarsening process selects the wavelength at the threshold to stability. Based on the physical intuition that coarsening is driven by competition for mass and interrupted by weak source terms that break strict mass conservation, we develop a singular perturbation theory for the stability of stationary patterns. The resulting closed-form analytical expressions enable us to quantitatively predict the coarsening dynamics and the final pattern wavelength. We find excellent agreement with numerical results throughout the diffusion- and reaction-limited regimes of the dynamics, including the crossover region. Further, we show how, in these limits, the two-component reaction-diffusion systems map to generalized Cahn-Hilliard and conserved Allen-Cahn dynamics, therefore providing a link to these two fundamental scalar field theories. The systematic understanding of the length-scale dynamics of fully nonlinear patterns in two-component systems provided here builds the basis to reveal the mechanisms underlying wavelength selection in multicomponent systems with potentially several conservation laws.
细胞内蛋白质模式由(近乎)质量守恒的反应扩散系统描述。虽然这些模式最初由于广为人知的图灵不稳定性从均匀稳态形成,但对于完全非线性模式的动力学尚无通用理论。我们针对(近乎)质量守恒的双组分反应扩散系统中的非线性波长选择动力学发展了一种统一理论,该理论与所选择的具体数学模型无关。先前的工作表明,这些系统支持极宽范围的稳定波长,但选择特定波长的机制仍不清楚。我们表明,一个中断的粗化过程在稳定性阈值处选择波长。基于粗化由质量竞争驱动且被打破严格质量守恒的弱源项中断的物理直觉,我们为稳态模式的稳定性发展了一种奇异摄动理论。由此得到的封闭形式解析表达式使我们能够定量预测粗化动力学和最终模式波长。我们发现在动力学的整个扩散和反应受限区域,包括交叉区域,与数值结果都有很好的一致性。此外,我们展示了在这些极限情况下,双组分反应扩散系统如何映射到广义的卡恩 - 希利厄德动力学和守恒的艾伦 - 卡恩动力学,从而建立了与这两个基本标量场理论的联系。这里对双组分系统中完全非线性模式的长度尺度动力学的系统理解为揭示具有可能多个守恒定律的多组分系统中波长选择的潜在机制奠定了基础。