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亚北极生态系统石油污染条件下的土壤微生物群落

Soil Microbiome in Conditions of Oil Pollution of Subarctic Ecosystems.

作者信息

Melekhina Elena N, Belykh Elena S, Kanev Vladimir A, Taskaeva Anastasia A, Tarabukin Dmitry V, Zinovyeva Aurika N, Velegzhaninov Ilya O, Rasova Elena E, Baturina Olga A, Kabilov Marsel R, Markarova Maria Yu

机构信息

Institute of Biology, Komi Scientifc Center, Ural Branch of Russian Academy of Sciences (IB FRC Komi SC UB RAS), Kommunisticheskaya 28, 167982 Syktyvkar, Russia.

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences (ICBFM SB RAS), Lavrentieva 8, 630090 Novosibirsk, Russia.

出版信息

Microorganisms. 2023 Dec 30;12(1):80. doi: 10.3390/microorganisms12010080.

Abstract

The present study aimed to investigate the recovery of soil quality and the bacterial and fungal communities following various recultivation methods in areas contaminated with oil. Oil spills are known to have severe impacts on ecosystems; thus, the restoration of contaminated soils has become a significant challenge nowadays. The study was conducted in the forest-tundra zone of the European North-East, where 39 soil samples from five oil-contaminated sites and reference sites were subjected to metagenomic analyses. The contaminated sites were treated with different biopreparations, and the recovery of soil quality and microbial communities were analyzed. The analysis of bacteria and fungi communities was carried out using 16S rDNA and ITS metabarcoding. It was found that 68% of bacterial OTUs and 64% of fungal OTUs were unique to the reference plot and not registered in any of the recultivated plots. However, the species diversity of recultivated sites was similar, with 50-80% of bacterial OTUs and 44-60% of fungal OTUs being common to all sites. New data obtained through soil metabarcoding confirm our earlier conclusions about the effectiveness of using biopreparations with indigenous oil-oxidizing micro-organisms also with mineral fertilizers, and herbaceous plant seeds for soil remediation. It is possible that the characteristics of microbial communities will be informative in the bioindication of soils reclaimed after oil pollution.

摘要

本研究旨在调查石油污染地区采用各种复垦方法后土壤质量以及细菌和真菌群落的恢复情况。众所周知,石油泄漏会对生态系统产生严重影响;因此,如今受污染土壤的修复已成为一项重大挑战。该研究在欧洲东北部的森林苔原区进行,对来自五个石油污染场地和对照场地的39个土壤样本进行了宏基因组分析。对污染场地使用了不同的生物制剂,并分析了土壤质量和微生物群落的恢复情况。使用16S rDNA和ITS宏条形码对细菌和真菌群落进行了分析。结果发现,68%的细菌OTU和64%的真菌OTU是对照地块所特有的,在任何一个复垦地块中都未检测到。然而,复垦场地的物种多样性相似,所有场地中50 - 80%的细菌OTU和44 - 60%的真菌OTU是共有的。通过土壤宏条形码获得的新数据证实了我们之前关于使用含有本地石油氧化微生物的生物制剂以及矿物肥料和草本植物种子进行土壤修复有效性的结论。微生物群落的特征可能对石油污染后复垦土壤进行生物指示具有参考价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7a8d/10820038/b61fe886d550/microorganisms-12-00080-g001.jpg

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