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北美硬叶常绿灌木(壳斗科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of the North American sclerophyllous evergreen shrub, (Fagaceae).

作者信息

Gantsetseg Amarsanaa, Han Eun-Kyeong, Lee Jung-Hyun

机构信息

Department of Biology Education, Chonnam National University, Gwangju, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2024 Jan 18;9(1):123-127. doi: 10.1080/23802359.2024.2305398. eCollection 2024.

Abstract

(section ; Fagaceae) is an evergreen shrub characteristic in central Arizona and it concerns one of the most abundant and economically important genera of in the Northern Hemisphere. Here, we have sequenced the complete chloroplast genome to provide insight into the phylogenetic relationship of . The whole genome is 161,208 bp in length with two inverted repeat regions of 25,827 bp each, which separate a large single-copy region of 90,552 bp and a small single-copy region of 19,002 bp. A total of 136 genes were annotated, including 88 protein-coding genes, eight ribosomal RNAs, and 40 transfer RNAs. The result of the maximum-likelihood phylogenetic analysis strongly suggested that had a close relationship to with strong bootstrap support.

摘要

(壳斗科)是一种生长于亚利桑那州中部的常绿灌木,是北半球最丰富且具有重要经济意义的属之一。在此,我们对其完整叶绿体基因组进行了测序,以深入了解该属的系统发育关系。整个基因组长度为161,208 bp,有两个反向重复区域,每个区域长度为25,827 bp,它们将一个90,552 bp的大单拷贝区域和一个19,002 bp的小单拷贝区域分隔开来。总共注释了136个基因,包括88个蛋白质编码基因、8个核糖体RNA和40个转运RNA。最大似然系统发育分析结果强烈表明,该属与具有紧密的关系,且有很强的自展支持。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8abb/10802804/b121939c790e/TMDN_A_2305398_F0001_C.jpg

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