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组蛋白伴侣 ASF1 对复制性组蛋白 RNA 代谢的调控。

Regulation of replicative histone RNA metabolism by the histone chaperone ASF1.

机构信息

Institut Curie, PSL Research University, Sorbonne Université, CNRS UMR3664, Laboratoire Dynamique du Noyau, Equipe Labellisée Ligue contre le Cancer, 75005 Paris, France.

Institut Curie, PSL Research University, Sorbonne Université, CNRS UMR3664, Laboratoire Dynamique du Noyau, 75005 Paris, France; Institut Curie, PSL Research University, Sorbonne Université, CNRS UMR168, Laboratoire Physico Chimie Curie, 75005 Paris, France.

出版信息

Mol Cell. 2024 Feb 15;84(4):791-801.e6. doi: 10.1016/j.molcel.2023.12.038. Epub 2024 Jan 22.

Abstract

In S phase, duplicating and assembling the whole genome into chromatin requires upregulation of replicative histone gene expression. Here, we explored how histone chaperones control histone production in human cells to ensure a proper link with chromatin assembly. Depletion of the ASF1 chaperone specifically decreases the pool of replicative histones both at the protein and RNA levels. The decrease in their overall expression, revealed by total RNA sequencing (RNA-seq), contrasted with the increase in nascent/newly synthesized RNAs observed by 4sU-labeled RNA-seq. Further inspection of replicative histone RNAs showed a 3' end processing defect with an increase of pre-mRNAs/unprocessed transcripts likely targeted to degradation. Collectively, these data argue for a production defect of replicative histone RNAs in ASF1-depleted cells. We discuss how this regulation of replicative histone RNA metabolism by ASF1 as a "chaperone checkpoint" fine-tunes the histone dosage to avoid unbalanced situations deleterious for cell survival.

摘要

在 S 期,将整个基因组复制并组装成染色质需要上调复制组蛋白基因的表达。在这里,我们探讨了组蛋白伴侣如何控制人类细胞中的组蛋白产生,以确保与染色质组装的适当联系。ASF1 伴侣蛋白的消耗特异性地降低了蛋白质和 RNA 水平上的复制组蛋白池。通过总 RNA 测序 (RNA-seq) 揭示的整体表达减少,与通过 4sU 标记 RNA-seq 观察到的新合成/新合成 RNA 的增加形成对比。对复制组蛋白 RNA 的进一步检查显示 3'端加工缺陷,前 mRNA/未加工转录本增加,可能靶向降解。总的来说,这些数据表明 ASF1 耗尽细胞中的复制组蛋白 RNA 产生存在缺陷。我们讨论了 ASF1 如何通过这种复制组蛋白 RNA 代谢的调节作为“伴侣蛋白检查点”来微调组蛋白剂量,以避免对细胞生存有害的不平衡情况。

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