Department of Cardiology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China.
Department of Nephrology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, 400010, China.
Funct Integr Genomics. 2024 Jan 24;24(1):18. doi: 10.1007/s10142-024-01290-6.
The T-box family transcription factor 18 (Tbx18) has been found to play a critical role in regulating the development of the mammalian heart during the primary stages of embryonic development while the cellular heterogeneity and landscape of Tbx18-positive (Tbx18+) cardiac cells remain incompletely characterized. Here, we analyzed prior published single-cell RNA sequencing (scRNA-seq) mouse heart data to explore the heterogeneity of Tbx18+ cardiac cell subpopulations and provide a comprehensive transcriptional landscape of Tbx18+ cardiac cells during their development. Bioinformatic analysis methods were utilized to identify the heterogeneity between cell groups. Based on the gene expression characteristics, Tbx18+ cardiac cells can be classified into a minimum of two distinct cell populations, namely fibroblast-like cells and cardiomyocytes. In terms of temporal heterogeneity, these cells exhibit three developmental stages, namely the MEM stage, ML_P0 stage, and P stage Tbx18+ cardiac cells. Furthermore, Tbx18+ cardiac cells encompass several cell types, including cardiac progenitor-like cells, cardiomyocytes, and epicardial/stromal cells, as determined by specific transcriptional regulatory networks. The scRNA-seq results revealed the involvement of extracellular matrix (ECM) signals and epicardial epithelial-to-mesenchymal transition (EMT) in the development of Tbx18+ cardiac cells. The utilization of a lineage-tracing model served to validate the crucial function of Tbx18 in the differentiation of cardiac cells. Consequently, these findings offer a comprehensive depiction of the cellular heterogeneity within Tbx18+ cardiac cells.
T 框家族转录因子 18(Tbx18)在胚胎发育的早期阶段对于调节哺乳动物心脏的发育起着关键作用,而 Tbx18 阳性(Tbx18+)心肌细胞的细胞异质性和景观仍然不完全特征化。在这里,我们分析了之前发表的单细胞 RNA 测序(scRNA-seq)小鼠心脏数据,以探讨 Tbx18+心肌细胞亚群的异质性,并提供 Tbx18+心肌细胞在发育过程中的全面转录景观。生物信息学分析方法用于识别细胞群之间的异质性。基于基因表达特征,Tbx18+心肌细胞可分为至少两种不同的细胞群,即成纤维细胞样细胞和心肌细胞。在时间异质性方面,这些细胞表现出三个发育阶段,即 MEM 阶段、ML_P0 阶段和 P 阶段 Tbx18+心肌细胞。此外,Tbx18+心肌细胞包含几种细胞类型,包括心脏祖细胞样细胞、心肌细胞和心外膜/基质细胞,这是由特定的转录调控网络决定的。scRNA-seq 结果表明,细胞外基质(ECM)信号和心外膜上皮到间充质转化(EMT)参与了 Tbx18+心肌细胞的发育。谱系追踪模型的应用验证了 Tbx18 在心脏细胞分化中的关键作用。因此,这些发现提供了 Tbx18+心肌细胞内细胞异质性的全面描述。