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定量细菌中的混合连接β-葡聚糖(MLG)。

Quantification of Mixed-Linkage β-Glucan (MLG) in Bacteria.

机构信息

Department of Soil and Plant Microbiology, Estación Experimental del Zaidín, CSIC, Granada, Spain.

出版信息

Methods Mol Biol. 2024;2751:133-143. doi: 10.1007/978-1-0716-3617-6_9.

Abstract

Prokaryotes are known to produce and secrete a broad range of biopolymers with a high functional and structural heterogeneity, often with critical duties in the bacterial physiology and ecology. Among these, exopolysaccharides (EPS) play relevant roles in the interaction of bacteria with eukaryotic hosts. EPS can help to colonize the host and assist in bacterial survival, making this interaction more robust by facilitating the formation of structured biofilms. In addition, they are often key molecules in the specific recognition mechanisms involved in both beneficial and pathogenic bacteria-host interactions. A novel EPS known as MLG (Mixed-Linkage β-Glucan) was recently discovered in rhizobia, where it participates in bacterial aggregation and biofilm formation and is required for efficient attachment to the roots of their legume host plants. MLG is the first and, so far, the only reported linear Mixed-Linkage β-glucan in bacteria, containing a perfect alternation of β (1 → 3) and β (1 → 4) bonds. A phylogenetic study of MLG biosynthetic genes suggests that far from being exclusive of rhizobia, different soil and plant-associated bacteria likely produce MLG, adding this novel polymer to the plethora of surface polysaccharides that help bacteria thrive in the changing environment and to establish successful interactions with their hosts.In this work, a quantification method for MLG is proposed. It relays on the hydrolysis of MLG by a specific enzyme (lichenase), and the subsequent quantification of the released disaccharide (laminaribiose) by the phenol-sulfuric acid method. The protocol has been set up and optimized for its use in 96-well plates, which makes it suitable for high-throughput screening (HTS) approaches. This method stands out by its fast processing, technical simplicity, and capability to handle multiple samples and biological replicates at a time.

摘要

原核生物被认为能够产生和分泌具有高度功能和结构异质性的广泛的生物聚合物,这些聚合物在细菌生理学和生态学中经常具有关键作用。在这些生物聚合物中,胞外多糖(EPS)在细菌与真核宿主的相互作用中发挥相关作用。EPS 可以帮助细菌定殖宿主并协助细菌存活,通过促进结构化生物膜的形成,使这种相互作用更加稳健。此外,它们通常是涉及有益和病原细菌-宿主相互作用的特定识别机制中的关键分子。最近在根瘤菌中发现了一种新型 EPS,称为 MLG(混合链接β-葡聚糖),它参与细菌聚集和生物膜形成,并且是有效附着到其豆科宿主植物根部所必需的。MLG 是第一个也是迄今为止唯一报道的细菌中线性混合链接β-葡聚糖,含有完美交替的β(1→3)和β(1→4)键。对 MLG 生物合成基因的系统发育研究表明,远非根瘤菌所特有,不同的土壤和植物相关细菌可能会产生 MLG,将这种新型聚合物添加到众多帮助细菌在不断变化的环境中茁壮成长的表面多糖中,并与它们的宿主建立成功的相互作用。在这项工作中,提出了一种 MLG 的定量方法。它依赖于特定酶(lichenase)对 MLG 的水解,以及随后通过苯酚-硫酸法对释放的二糖(laminaribiose)的定量。该方案已经为在 96 孔板中的使用进行了设置和优化,使其适用于高通量筛选(HTS)方法。该方法的特点是处理速度快、技术简单,并且能够一次处理多个样品和生物学重复。

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