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金黄色葡萄球菌 GTPase YsxC 的晶体结构。

Crystal structure of GTPase YsxC from Staphylococcus aureus.

机构信息

Kazan Federal University, 18 Kremlyovskaya St., 420008, Kazan, Russian Federation.

Kazan Federal University, 18 Kremlyovskaya St., 420008, Kazan, Russian Federation; Federal Research Center «Kazan Scientific Center of Russian Academy of Sciences», Kazan, 420111, Russian Federation.

出版信息

Biochem Biophys Res Commun. 2024 Mar 5;699:149545. doi: 10.1016/j.bbrc.2024.149545. Epub 2024 Jan 17.

Abstract

The YsxC protein from Staphylococcus aureus is a GTP-binding protein from the TRAFAC superfamily of the TrmE-Era-EngA-EngB-Septin-like GTPase class, EngB family of GTPases. Recent structural and biochemical studies of YsxC function show that it is an integral part of the pathogenic microorganism life cycle, as it is involved in the assembly of the large 50S ribosomal subunit. Structural studies of this protein with its specific functional features make it an attractive target for further development of new selective antimicrobials. In this study, we cloned the ysxC protein gene from S. aureus, overexpressed the protein in E. coli, and subsequently purified and crystallized it. Protein crystals were successfully grown using the vapor diffusion method, yielding diffraction data with a resolution of up to 2 Å. Comparative analysis of the structure of SaYsxC with known three-dimensional structures of homologs from other microorganisms showed the presence of structural differences for the apo form.

摘要

金黄色葡萄球菌的 YsxC 蛋白是一种 GTP 结合蛋白,属于 TRAFAC 超家族的 TrmE-Era-EngA-EngB-Septin 样 GTPase 类,EngB 家族的 GTPases。最近对 YsxC 功能的结构和生化研究表明,它是病原微生物生命周期的一个组成部分,因为它参与了大型 50S 核糖体亚基的组装。对该蛋白及其特定功能特征的结构研究使其成为进一步开发新型选择性抗菌药物的有吸引力的靶标。在这项研究中,我们从金黄色葡萄球菌中克隆了 ysxC 蛋白基因,在大肠杆菌中过表达该蛋白,然后对其进行纯化和结晶。通过气相扩散法成功地培养出蛋白晶体,得到了分辨率高达 2Å 的衍射数据。对 SaYsxC 结构与其他微生物同源物的已知三维结构的比较分析表明,apo 形式存在结构差异。

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