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利用拟南芥中的病毒衍生双链 RNA 分析植物病毒诱导的免疫。

Analysis of Plant Virus-Induced Immunity by Using Viral-Derived Double-Stranded RNA in Arabidopsis thaliana.

机构信息

State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Plant Virology, Ningbo University, Ningbo, China.

出版信息

Methods Mol Biol. 2024;2771:99-110. doi: 10.1007/978-1-0716-3702-9_14.

DOI:10.1007/978-1-0716-3702-9_14
PMID:38285396
Abstract

Pattern-triggered immunity is the first line of defense against infection by pathogens such as bacteria and fungi in plants, and this mechanism remains poorly defined in plant viruses. Double-stranded RNA (dsRNA) is an intermediate in the replication of plant RNA viruses, and is considered to be a conserved structure of plant viruses similar to pathogen-associated molecular pattern. Whether dsRNA is the elicitor that activates plant immunity in response to virus infection remains obscure. In this method, we use the cDNA of turnip mosaic virus genome as the template to in vitro synthesis of viral dsRNA and examine whether viral dsRNA could activate plant immunity in Arabidopsis thaliana, including MAPK kinase cascade and reactive oxygen burst. In order to provide some references for researchers studying dsRNA in terms of research methodology and experimental methods, we use western blot to measure MAPK kinase cascade and luminol-based assay to measure ROS burst in Arabidopsis thaliana treated by viral dsRNA.

摘要

模式触发免疫是植物抵御细菌和真菌等病原体感染的第一道防线,而这种机制在植物病毒中仍未得到很好的定义。双链 RNA (dsRNA) 是植物 RNA 病毒复制的中间产物,被认为是类似于病原体相关分子模式的植物病毒的保守结构。dsRNA 是否是植物对病毒感染产生免疫反应的激发剂尚不清楚。在本方法中,我们使用芜菁花叶病毒基因组的 cDNA 作为模板,体外合成病毒 dsRNA,并研究病毒 dsRNA 是否能在拟南芥中激活植物免疫,包括 MAPK 激酶级联反应和活性氧爆发。为了为研究 dsRNA 的研究人员在研究方法和实验方法方面提供一些参考,我们使用 Western blot 来测量 MAPK 激酶级联反应,并用发光氨法来测量拟南芥中 ROS 爆发。

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Methods Mol Biol. 2024;2771:99-110. doi: 10.1007/978-1-0716-3702-9_14.
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本文引用的文献

1
Turnip mosaic virus co-opts the vacuolar sorting receptor VSR4 to promote viral genome replication in plants by targeting viral replication vesicles to the endosome.芜菁花叶病毒通过将病毒复制囊泡靶向内涵体,利用液泡分选受体VSR4来促进病毒基因组在植物中的复制。
PLoS Pathog. 2022 Jan 24;18(1):e1010257. doi: 10.1371/journal.ppat.1010257. eCollection 2022 Jan.
2
Molecular mechanisms of early plant pattern-triggered immune signaling.早期植物模式触发免疫信号的分子机制。
Mol Cell. 2021 Sep 2;81(17):3449-3467. doi: 10.1016/j.molcel.2021.07.029. Epub 2021 Aug 16.
3
Nucleic acid-mediated PAMP-triggered immunity in plants.
植物中核酸介导的病原体相关分子模式触发的免疫反应
Curr Opin Virol. 2020 Jun;42:32-39. doi: 10.1016/j.coviro.2020.04.003. Epub 2020 Jun 3.
4
Elicitor and Receptor Molecules: Orchestrators of Plant Defense and Immunity.激发子和受体分子:植物防御和免疫的协调者。
Int J Mol Sci. 2020 Jan 31;21(3):963. doi: 10.3390/ijms21030963.
5
RIG-I and Other RNA Sensors in Antiviral Immunity.RIG-I 及其他 RNA 传感器在抗病毒免疫中的作用。
Annu Rev Immunol. 2018 Apr 26;36:667-694. doi: 10.1146/annurev-immunol-042617-053309.
6
Geminiviruses and Plant Hosts: A Closer Examination of the Molecular Arms Race.双生病毒与植物宿主:对分子军备竞赛的深入审视
Viruses. 2017 Sep 15;9(9):256. doi: 10.3390/v9090256.
7
Sequence-Specific Sensing of Nucleic Acids.核酸的序列特异性传感
Trends Immunol. 2017 Jan;38(1):53-65. doi: 10.1016/j.it.2016.10.006. Epub 2016 Nov 14.
8
Regulation of pattern recognition receptor signalling in plants.植物模式识别受体信号转导的调控。
Nat Rev Immunol. 2016 Sep;16(9):537-52. doi: 10.1038/nri.2016.77. Epub 2016 Aug 1.
9
Double-stranded RNAs induce a pattern-triggered immune signaling pathway in plants.双链RNA在植物中诱导一种模式触发的免疫信号通路。
New Phytol. 2016 Aug;211(3):1008-19. doi: 10.1111/nph.13944. Epub 2016 Mar 31.
10
Bacterial RNAs activate innate immunity in Arabidopsis.细菌RNA激活拟南芥中的先天免疫。
New Phytol. 2016 Jan;209(2):785-97. doi: 10.1111/nph.13717. Epub 2015 Oct 26.