Schaus Sadie R, Vasconcelos Periera Gabriel, Luis Ana S, Madlambayan Emily, Terrapon Nicolas, Ostrowski Matthew P, Jin Chunsheng, Hansson Gunnar C, Martens Eric C
bioRxiv. 2024 Jan 16:2024.01.15.575725. doi: 10.1101/2024.01.15.575725.
Symbiotic interactions between humans and our communities of resident gut microbes (microbiota) play many roles in health and disease. Some gut bacteria utilize mucus as a nutrient source and can under certain conditions damage the protective barrier it forms, increasing disease susceptibility. We investigated how a known mucin-degrader that remains poorly studied despite its implication in inflammatory bowel diseases (IBDs)- degrades mucin glycoproteins or their component -linked glycans to understand its effects on the availability of mucin-derived nutrients for other bacteria. We found that utilizes both mucin glycoproteins and released oligosaccharides from gastric and colonic mucins, degrading these substrates with a panoply of mostly constitutively expressed, secreted enzymes. Investigation of mucin oligosaccharide degradation by revealed strong fucosidase, sialidase and β1,4-galactosidase activities. There was a lack of detectable sulfatase and weak β1,3-galactosidase degradation, resulting in accumulation of glycans containing these structures on mucin polypeptides. While the Gram-negative symbiont, grows poorly on mucin glycoproteins, we demonstrate a clear ability of to liberate products from mucins, making them accessible to . This work underscores the diversity of mucin-degrading mechanisms in different bacterial species and the probability that some species are contingent on others for the ability to more fully access mucin-derived nutrients. The ability of to directly degrade a variety of mucin and mucin glycan structures and unlock released glycans for other species suggests that it is a keystone mucin degrader, which may contribute to its association with IBD.
An important facet of maintaining healthy symbiosis between host and intestinal microbes is the mucus layer, the first defense protecting the epithelium from lumenal bacteria. Some gut bacteria degrade different components of intestinal mucins, but detailed mechanisms used by different species are still emerging. It is imperative to understand these mechanisms as they likely dictate interspecies interactions and may illuminate particular species associated with bacterial mucus destruction and subsequent disease susceptibility. is positively associated with IBD in multiple studies. We identified mucin glycan-degrading enzymes in and found that it shares mucin degradation products with another gut bacterium implicated in IBD, . Our findings underscore the importance of understanding the mucin degradation mechanisms of different gut bacteria and their consequences on interspecies interactions, which may identify keystone bacteria that disproportionately contribute to defects in mucus protection and could therefore be targets to prevent or treat IBD.
人类与我们的肠道常驻微生物群落(微生物群)之间的共生相互作用在健康和疾病中发挥着多种作用。一些肠道细菌将黏液作为营养源,在某些情况下会破坏黏液形成的保护屏障,增加疾病易感性。我们研究了一种已知的黏蛋白降解菌,尽管它与炎症性肠病(IBD)有关,但仍研究不足——它如何降解黏蛋白糖蛋白或其组成的O-连接聚糖,以了解其对其他细菌可利用的黏蛋白衍生营养物质的影响。我们发现该菌利用黏蛋白糖蛋白以及从胃和结肠黏液中释放的寡糖,通过一系列大多组成性表达、分泌的酶来降解这些底物。对该菌黏蛋白寡糖降解的研究揭示了很强的岩藻糖苷酶、唾液酸酶和β1,4-半乳糖苷酶活性。缺乏可检测到的硫酸酯酶且β1,3-半乳糖苷酶降解较弱,导致含有这些结构的聚糖在黏蛋白多肽上积累。虽然革兰氏阴性共生菌在黏蛋白糖蛋白上生长不佳,但我们证明该菌具有从黏蛋白中释放产物的明显能力,使这些产物可供利用。这项工作强调了不同细菌物种中黏蛋白降解机制的多样性,以及某些物种可能依赖其他物种来更充分获取黏蛋白衍生营养物质的可能性。该菌直接降解多种黏蛋白和黏蛋白聚糖结构并为其他物种释放聚糖的能力表明它是一种关键的黏蛋白降解菌,这可能与其与IBD的关联有关。
维持宿主与肠道微生物之间健康共生关系的一个重要方面是黏液层,它是保护上皮细胞免受管腔细菌侵害的第一道防线。一些肠道细菌会降解肠道黏蛋白的不同成分,但不同物种所使用的详细机制仍在不断显现。了解这些机制至关重要,因为它们可能决定种间相互作用,并可能揭示与细菌黏液破坏及随后疾病易感性相关的特定物种。在多项研究中,该菌与IBD呈正相关。我们在该菌中鉴定出黏蛋白聚糖降解酶,并发现它与另一种与IBD有关的肠道细菌共享黏蛋白降解产物。我们的研究结果强调了了解不同肠道细菌黏蛋白降解机制及其对种间相互作用影响的重要性,这可能会识别出对黏液保护缺陷有不成比例贡献的关键细菌,因此可能成为预防或治疗IBD的靶点。