University of Groningen, Centre for Systems Chemistry, Stratingh Institute, Nijenborgh 4, 9747 AG, Groningen, The Netherlands.
Instituto de Bio-Orgánica "Antonio González" (IUBO-AG), Departamento de Química Orgánica, Universidad de La Laguna, Avda. Astrofísico Fco. Sánchez, 38206, San Cristóbal de La Laguna, Santa Cruz de Tenerife, Spain.
Chemistry. 2024 Apr 5;30(20):e202303837. doi: 10.1002/chem.202303837. Epub 2024 Feb 19.
Darwinian evolution, including the selection of the fittest species under given environmental conditions, is a major milestone in the development of synthetic living systems. In this regard, generalist or specialist behavior (the ability to replicate in a broader or narrower, more specific food environment) are of importance. Here we demonstrate generalist and specialist behavior in dynamic combinatorial libraries composed of a peptide-based and an oligo(ethylene glycol) based building block. Three different sets of macrocyclic replicators could be distinguished based on their supramolecular organization: two prepared from a single building block as well as one prepared from an equimolar mixture of them. Peptide-containing hexamer replicators were found to be generalists, i. e. they could replicate in a broad range of food niches, whereas the octamer peptide-based replicator and hexameric ethyleneoxide-based replicator were proven to be specialists, i. e. they only replicate in very specific food niches that correspond to their composition. However, sequence specificity cannot be demonstrated for either of the generalist replicators. The generalist versus specialist nature of these replicators was linked to their supramolecular organization. Assembly modes that accommodate structurally different building blocks lead to generalist replicators, while assembly modes that are more restrictive yield specialist replicators.
达尔文进化,包括在给定环境条件下选择最适应的物种,是合成生命系统发展的一个主要里程碑。在这方面,多面手或专家行为(在更广泛或更窄、更具体的食物环境中复制的能力)很重要。在这里,我们展示了由基于肽和基于聚乙二醇的构建块组成的动态组合文库中的多面手和专家行为。根据它们的超分子组织,可以区分出三组不同的大环复制子:两组由单个构建块制备,一组由它们的等摩尔混合物制备。含有肽的六聚体复制子被证明是多面手,也就是说,它们可以在广泛的食物环境中复制,而基于八聚体肽的复制子和基于六聚体氧化乙烯的复制子则被证明是专家,也就是说,它们只能在与其组成非常对应的非常特定的食物环境中复制。然而,对于多面手复制子中的任何一个都不能证明其序列特异性。这些复制子的多面手与专家性质与其超分子组织有关。能够容纳结构不同的构建块的组装模式导致多面手复制子,而更具限制性的组装模式则产生专家复制子。