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从福尔马林固定的自然老化神经肌肉骨骼组织中提取高质量 RNA。

Extracting high-quality RNA from formaldehyde-fixed naturally aged neuromusculoskeletal tissues.

机构信息

Shirley Ryan AbilityLab, Chicago, IL 60611, USA.

Department of Physical Medicine & Rehabilitation, Northwestern University, Chicago, IL 60611, USA.

出版信息

Biotechniques. 2024 Apr;76(4):153-160. doi: 10.2144/btn-2023-0092. Epub 2024 Feb 9.

Abstract

Modern approaches to discovering molecular mechanisms and validating treatments for age-related neuromusculoskeletal dysfunction typically rely on high-throughput transcriptome analysis. Previously harvested and fixed tissues offer an incredible reservoir of untapped molecular information. However, obtaining RNA from such formaldehyde-fixed neuromusculoskeletal tissues, especially fibrotic aged tissues, is technically challenging and often results in RNA degradation, chemical modification and yield reduction, prohibiting further analysis. Therefore, we developed a protocol to extract high-quality RNA from formaldehyde-fixed brain, cartilage, muscle and peripheral nerve isolated from naturally aged mice. Isolated RNA produced reliable gene expression data comparable to fresh and flash-frozen tissues and was sensitive enough to detect age-related changes, making our protocol valuable to researchers in the field of aging.

摘要

现代发现与年龄相关的神经肌肉骨骼功能障碍的分子机制和验证治疗方法的方法通常依赖于高通量转录组分析。以前采集和固定的组织提供了大量未开发的分子信息。然而,从福尔马林固定的神经肌肉骨骼组织中获取 RNA,特别是纤维化的老年组织,在技术上具有挑战性,并且通常会导致 RNA 降解、化学修饰和产量减少,从而阻止进一步分析。因此,我们开发了一种从自然衰老的小鼠中分离的福尔马林固定的大脑、软骨、肌肉和周围神经中提取高质量 RNA 的方案。分离的 RNA 产生了可靠的基因表达数据,可与新鲜和速冻组织相媲美,并且足够灵敏以检测与年龄相关的变化,使我们的方案对衰老领域的研究人员具有价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/621c/10988388/825438dd9d0a/btn-76-153-g1.jpg

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