Department of Oncological Sciences, The Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Department of Pharmacological Sciences, The Icahn School of Medicine at Mount Sinai, New York, New York, USA; Drug Discovery Institute, The Icahn School of Medicine at Mount Sinai, New York, New York, USA.
J Biol Chem. 2024 Mar;300(3):105753. doi: 10.1016/j.jbc.2024.105753. Epub 2024 Feb 13.
Ubiquitination often generates lysine 48-linked polyubiquitin chains that signal proteolytic destruction of the protein target. A significant subset of ubiquitination proceeds by a priming/extending mechanism, in which a substrate is first monoubiquitinated with a priming E2-conjugating enzyme or a set of E3 ARIH/E2 enzymes specific for priming. This is then followed by ubiquitin (Ub) chain extension catalyzed by an E2 enzyme capable of elongation. This report provides further insights into the priming/extending mechanism. We employed reconstituted ubiquitination systems of substrates CK1α (casein kinase 1α) and β-catenin by Cullin-RING E3 Ub ligases (CRLs) CRL4 and CRL1, respectively, in the presence of priming E2 UbcH5c and elongating E2 Cdc34b (cell division cycle 34b). We have established a new "apyrase chase" strategy that uncouples priming from chain elongation, which allows accurate measurement of the decay rates of the ubiquitinated substrate with a defined chain length. Our work has revealed highly robust turnover of monoubiquitinated β-catenin that empowers efficient polyubiquitination. The results of competition experiments suggest that the interactions between the ubiquitinated β-catenin and CRL1 are highly dynamic. Moreover, ubiquitination of the Ub-modified β-catenin appeared more resistant to inhibition by competitors than the unmodified substrate, suggesting tighter binding with CRL1. These findings support a role for conjugated Ub in enhancing interactions with E3.
泛素化通常会产生赖氨酸 48 连接的多泛素链,从而引发蛋白质靶标的蛋白水解破坏。泛素化的一个重要子集通过引发/延伸机制进行,其中底物首先与引发 E2 连接酶或一组专门用于引发的 E3 ARIH/E2 酶进行单泛素化。然后,由能够进行延伸的 E2 酶催化泛素 (Ub) 链延伸。本报告进一步深入了解了引发/延伸机制。我们分别使用 Cullin-RING E3 Ub 连接酶 (CRL) CRL4 和 CRL1 对 CK1α(酪蛋白激酶 1α)和β-连环蛋白等底物的重组泛素化系统,在引发 E2 UbcH5c 和延伸 E2 Cdc34b(细胞分裂周期 34b)的存在下进行了实验。我们建立了一种新的“apyrase 追踪”策略,可将引发与链延伸解耦,从而可以准确测量具有定义链长的泛素化底物的衰减率。我们的工作揭示了单泛素化β-连环蛋白的高度稳健周转率,从而实现了有效的多泛素化。竞争实验的结果表明,泛素化的β-连环蛋白与 CRL1 之间的相互作用高度动态。此外,Ub 修饰的β-连环蛋白的泛素化似乎比未修饰的底物更能抵抗抑制剂的抑制,这表明与 CRL1 的结合更紧密。这些发现支持共轭 Ub 在增强与 E3 的相互作用中的作用。