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验证裸鳃亚目动物的分子钟——没有化石来帮忙。

Validating a molecular clock for nudibranchs-No fossils to the rescue.

作者信息

Layton Kara K S, Wilson Nerida G

机构信息

School of Biological Sciences University of Aberdeen Aberdeen UK.

Department of Biology University of Toronto Mississauga Mississauga Ontario Canada.

出版信息

Ecol Evol. 2024 Feb 14;14(2):e11014. doi: 10.1002/ece3.11014. eCollection 2024 Feb.

DOI:10.1002/ece3.11014
PMID:38362166
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10867498/
Abstract

Time calibrated phylogenies are typically reconstructed with fossil information but for soft-bodied marine invertebrates that lack hard parts, a fossil record is lacking. In these cases, biogeographic calibrations or the rates of divergence for related taxa are often used. Although nudibranch phylogenies have advanced with the input of molecular data, no study has derived a divergence rate for this diverse group of invertebrates. Here, we use an updated closure date for the Isthmus of Panama (2.8 Ma) to derive the first divergence rates for chromodorid nudibranchs using multigene data from a geminate pair with broad phylogeographic sampling. Examining the species (Marcus & Marcus, 1967), we uncover deep divergences among eastern Pacific and western Atlantic clades and we erect a new species designation for the latter ( sp. nov.). Next, we discover extensive phylogeographic structure within sp. nov. , thereby refuting the hypothesis of a recent introduction. Lastly, we derive divergence rates for mitochondrial and nuclear loci that exceed known rates for other gastropods and we highlight significant rate heterogeneity both among markers and taxa. Together, these findings improve understanding of nudibranch systematics and provide rates useful to apply to divergence scenarios in this diverse group.

摘要

时间校准的系统发育树通常是利用化石信息重建的,但对于缺乏硬体部分的软体海洋无脊椎动物来说,化石记录是缺失的。在这些情况下,生物地理校准或相关类群的分化速率经常被使用。尽管裸鳃类的系统发育已因分子数据的输入而取得进展,但尚无研究得出这一多样的无脊椎动物类群的分化速率。在此,我们利用巴拿马地峡更新后的封闭时间(280万年前),通过对具有广泛系统地理学采样的一对双生体的多基因数据,得出了多彩海牛科裸鳃类动物的首个分化速率。研究(马库斯和马库斯,1967年)的物种时,我们发现东太平洋和西大西洋分支之间存在深度分化,并为后者设立了一个新的物种命名(新物种)。接下来,我们在新物种中发现了广泛的系统地理结构,从而驳斥了近期引入的假说。最后,我们得出了线粒体和核基因座的分化速率,这些速率超过了其他腹足类动物的已知速率,并且我们强调了标记物和类群之间显著的速率异质性。总之,这些发现增进了对裸鳃类系统学的理解,并提供了适用于这一多样类群分化情况的有用速率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deb4/10867498/35b8393e4d85/ECE3-14-e11014-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deb4/10867498/2b5274513b66/ECE3-14-e11014-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deb4/10867498/972713de71df/ECE3-14-e11014-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deb4/10867498/3363c6c9fdea/ECE3-14-e11014-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deb4/10867498/35b8393e4d85/ECE3-14-e11014-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deb4/10867498/2b5274513b66/ECE3-14-e11014-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deb4/10867498/972713de71df/ECE3-14-e11014-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deb4/10867498/3363c6c9fdea/ECE3-14-e11014-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/deb4/10867498/35b8393e4d85/ECE3-14-e11014-g001.jpg

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