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通过改变远端堆积残基对肽骨架的孔结构进行重构。

Pore Restructuring of Peptide Frameworks by Mutations at Distal Packing Residues.

机构信息

Department of Chemistry, University of Illinois Chicago, Chicago, Illinois 60607, United States.

Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States.

出版信息

Biomacromolecules. 2024 Mar 11;25(3):2016-2023. doi: 10.1021/acs.biomac.3c01418. Epub 2024 Feb 16.

DOI:10.1021/acs.biomac.3c01418
PMID:38362872
Abstract

Porous framework materials are highly useful for catalysis, adsorption, and separations. Though they are usually made from inorganic and organic building blocks, recently, folded peptides have been utilized for constructing frameworks, opening up an enormous structure-space for exploration. These peptides assemble in a metal-free fashion using π-stacking, H-bonding, dispersion forces, and the hydrophobic effect. Manipulation of pore-defining H-bonding residues is known to generate new topologies, but the impact of mutations in the hydrophobic packing region facing away from the pores is less obvious. To explore their effects, we synthesized variants of peptide frameworks with mutations in the hydrophobic packing positions and found by single-crystal X-ray crystallography (SC-XRD) that they induce significant changes to the framework pore structure. These structural changes are driven by a need to maximize van der Waals interactions of the nonpolar groups, which are achieved by various mechanisms including helix twisting, chain flipping, chain offsetting, and desymmetrization. Even subtle changes to the van der Waals interface, such as the introduction of a methyl group or isomeric replacement, result in significant pore restructuring. This study shows that the dispersion interactions upholding a peptide material are a rich area for structural engineering.

摘要

多孔骨架材料在催化、吸附和分离方面具有重要的应用价值。虽然它们通常由无机和有机构建块制成,但最近,折叠肽已被用于构建骨架,为探索开辟了广阔的结构空间。这些肽通过π堆积、氢键、色散力和疏水作用以无金属的方式组装。人们知道,对孔定域氢键残基的操作可以产生新的拓扑结构,但远离孔的疏水区位突变的影响则不太明显。为了探索这些影响,我们合成了突变体的肽骨架,并通过单晶 X 射线衍射(SC-XRD)发现,它们会导致骨架孔结构发生显著变化。这些结构变化是由最大化非极性基团范德华相互作用的需要驱动的,这可以通过各种机制实现,包括螺旋扭曲、链翻转、链偏移和非对称化。即使是非极性界面的微小变化,如引入甲基或异构体取代,也会导致显著的孔结构重构。本研究表明,支撑肽材料的色散相互作用是结构工程的一个丰富领域。

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