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天然产物生物合成中转录酶对蛋白结合底物的修饰。

Modifications of Protein-Bound Substrates by Trans-Acting Enzymes in Natural Products Biosynthesis.

机构信息

Department of Pharmaceutical Sciences, Oregon State University, 203 Pharmacy Building, Corvallis, Oregon, 97331, U.S.A.

出版信息

Chembiochem. 2024 Apr 16;25(8):e202400056. doi: 10.1002/cbic.202400056. Epub 2024 Mar 11.

Abstract

Enzymatic modifications of small molecules are a common phenomenon in natural product biosynthesis, leading to the production of diverse bioactive compounds. In polyketide biosynthesis, modifications commonly take place after the completion of the polyketide backbone assembly by the polyketide synthases and the mature products are released from the acyl-carrier protein (ACP). However, exceptions to this rule appear to be widespread, as on-line hydroxylation, methyl transfer, and cyclization during polyketide assembly process are common, particularly in trans-AT PKS systems. Many of these modifications are catalyzed by specific domains within the modular PKS systems. However, several of the on-line modifications are catalyzed by stand-alone proteins. Those include the on-line Baeyer-Villiger oxidation, α-hydroxylation, halogenation, epoxidation, and methyl esterification during polyketide assembly, dehydrogenation of ACP-bound short fatty acids by acyl-CoA dehydrogenase-like enzymes, and glycosylation of ACP-bound intermediates by discrete glycosyltransferase enzymes. This review article highlights some of these trans-acting proteins that catalyze enzymatic modifications of ACP-bound small molecules in natural product biosynthesis.

摘要

小分子的酶修饰是天然产物生物合成中的常见现象,导致产生了多种多样的生物活性化合物。在聚酮化合物生物合成中,修饰通常发生在聚酮化合物合酶完成聚酮化合物骨架组装之后,并且成熟产物从酰基载体蛋白 (ACP) 上释放出来。然而,这条规则似乎有很多例外,因为聚酮化合物组装过程中的在线羟化、甲基转移和环化很常见,特别是在反式 AT PKS 系统中。这些修饰中的许多都是由模块化 PKS 系统中的特定结构域催化的。然而,有几个在线修饰是由独立的蛋白质催化的。这些修饰包括聚酮化合物组装过程中的在线 Baeyer-Villiger 氧化、α-羟化、卤化、环氧化和甲酯化、酰基辅酶 A 脱氢酶样酶催化的 ACP 结合短脂肪酸的脱氢、以及离散糖基转移酶催化的 ACP 结合中间体的糖基化。本文综述了一些在天然产物生物合成中催化 ACP 结合小分子的酶修饰的反式作用蛋白。

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