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矽肺中铜死亡相关枢纽基因的鉴定和免疫细胞浸润模式。

Cuproptosis-associated hub gene identification and immune cell infiltration patterns in silicosis.

机构信息

Department of Occupational Medicine and Toxicology, Clinical Center for Interstitial Lung Diseases, Beijing Institute of Respiratory Medicine, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China; Department of Respiratory Medicine, Beijing Friendship Hospital, Capital Medical University, Beijing, China.

Department of Occupational Medicine and Toxicology, Clinical Center for Interstitial Lung Diseases, Beijing Institute of Respiratory Medicine, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.

出版信息

Toxicology. 2024 May;504:153762. doi: 10.1016/j.tox.2024.153762. Epub 2024 Feb 23.

Abstract

Recent research has hinted at a potential connection between silicosis, a fibrotic lung disease caused by exposure to crystalline silica particles, and cuproptosis. The aim of the study was to explore how cuproptosis-related genes (CRGs) may influence the development of silicosis and elucidate the underlying mechanisms. An analysis of genes associated with both silicosis and cuproptosis was conducted. Key gene identification was achieved through the application of two machine learning techniques. Additionally, the correlation between these key genes and immune cell populations was explored and the critical pathways were discerned. To corroborate our findings, the expression of key genes was verified in both a publicly available silica-induced mouse model and our own silicosis mouse model. A total of 12 differentially expressed CRGs associated with silicosis were identified. Further analysis resulted in the identification of 6 CRGs, namely LOX, SPARC, MOXD1, ALB, MT-CO2, and AOC2. Elevated immune cell infiltration of CD8 T cells, regulatory T cells, M0 macrophages, and neutrophils in silicosis patients compared to healthy controls was indicated. Validation in a silica-induced pulmonary fibrosis mouse model supported SPARC and MT-CO2 as potential signature genes for the prediction of silicosis. These findings highlight a strong association between silicosis and cuproptosis. Among CRGs, LOX, SPARC, MOXD1, ALB, MT-CO2, and AOC2 emerged as pivotal players in the context of silicosis by modulating CD8 T cells, regulatory T cells, M0 macrophages, and neutrophils.

摘要

最近的研究表明,矽肺(一种由暴露于结晶二氧化硅颗粒引起的纤维化肺部疾病)和铜死亡之间可能存在潜在联系。该研究旨在探讨铜死亡相关基因(CRGs)如何影响矽肺的发展,并阐明潜在机制。对与矽肺和铜死亡相关的基因进行了分析。通过应用两种机器学习技术,实现了关键基因的识别。此外,还探索了这些关键基因与免疫细胞群体之间的相关性,并确定了关键途径。为了证实我们的发现,在一个公开的二氧化硅诱导的小鼠模型和我们自己的矽肺小鼠模型中验证了关键基因的表达。确定了 12 个与矽肺相关的差异表达的 CRGs。进一步分析确定了 6 个 CRGs,即 LOX、SPARC、MOXD1、ALB、MT-CO2 和 AOC2。与健康对照组相比,矽肺患者的 CD8 T 细胞、调节性 T 细胞、M0 巨噬细胞和中性粒细胞的免疫细胞浸润增加。在二氧化硅诱导的肺纤维化小鼠模型中的验证支持 SPARC 和 MT-CO2 作为预测矽肺的潜在特征基因。这些发现强调了矽肺和铜死亡之间的强烈关联。在 CRGs 中,LOX、SPARC、MOXD1、ALB、MT-CO2 和 AOC2 通过调节 CD8 T 细胞、调节性 T 细胞、M0 巨噬细胞和中性粒细胞,成为矽肺背景下的关键参与者。

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