Biomedical Center, Molecular Biology Division, Ludwig-Maximilians-University of Munich, Planegg-Martinsried, Germany.
Life and Medical Sciences (LIMES) Institute, Rheinische Friedrich-Wilhelms-Universität Bonn, Bonn, Germany.
Nucleic Acids Res. 2024 May 22;52(9):4889-4905. doi: 10.1093/nar/gkae123.
Acetylation of lysine 16 of histone H4 (H4K16ac) stands out among the histone modifications, because it decompacts the chromatin fiber. The metazoan acetyltransferase MOF (KAT8) regulates transcription through H4K16 acetylation. Antibody-based studies had yielded inconclusive results about the selectivity of MOF to acetylate the H4 N-terminus. We used targeted mass spectrometry to examine the activity of MOF in the male-specific lethal core (4-MSL) complex on nucleosome array substrates. This complex is part of the Dosage Compensation Complex (DCC) that activates X-chromosomal genes in male Drosophila. During short reaction times, MOF acetylated H4K16 efficiently and with excellent selectivity. Upon longer incubation, the enzyme progressively acetylated lysines 12, 8 and 5, leading to a mixture of oligo-acetylated H4. Mathematical modeling suggests that MOF recognizes and acetylates H4K16 with high selectivity, but remains substrate-bound and continues to acetylate more N-terminal H4 lysines in a processive manner. The 4-MSL complex lacks non-coding roX RNA, a critical component of the DCC. Remarkably, addition of RNA to the reaction non-specifically suppressed H4 oligo-acetylation in favor of specific H4K16 acetylation. Because RNA destabilizes the MSL-nucleosome interaction in vitro we speculate that RNA accelerates enzyme-substrate turn-over in vivo, thus limiting the processivity of MOF, thereby increasing specific H4K16 acetylation.
组蛋白 H4 赖氨酸 16 的乙酰化(H4K16ac)在组蛋白修饰中尤为突出,因为它可使染色质纤维解压缩。真核生物乙酰转移酶 MOF(KAT8)通过 H4K16 乙酰化调节转录。基于抗体的研究对 MOF 对 H4 N 端进行乙酰化的选择性产生了不一致的结果。我们使用靶向质谱法在核小体阵列底物上的雄性特异性致死核心(4-MSL)复合物中检查 MOF 的活性。该复合物是剂量补偿复合物(DCC)的一部分,可激活雄性果蝇中的 X 染色体基因。在短反应时间内,MOF 有效地且具有极好的选择性乙酰化 H4K16。在更长的孵育时间后,该酶逐渐乙酰化赖氨酸 12、8 和 5,导致寡乙酰化 H4 的混合物。数学模型表明,MOF 以高选择性识别和乙酰化 H4K16,但仍与底物结合,并以连续的方式继续乙酰化更多的 N 端 H4 赖氨酸。4-MSL 复合物缺乏非编码的 roX RNA,这是非 DCC 的关键组成部分。值得注意的是,向反应中添加 RNA 会非特异性地抑制 H4 寡乙酰化,有利于特异性 H4K16 乙酰化。由于 RNA 在体外使 MSL-核小体相互作用不稳定,因此我们推测 RNA 在体内加速酶-底物周转,从而限制 MOF 的连续性,从而增加特异性 H4K16 乙酰化。