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衰老的全基因组表观遗传学分析:来自两个欧洲双胞胎队列的结果。

Epigenome-wide analysis of frailty: Results from two European twin cohorts.

机构信息

Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden.

Department of Pharmacology and Pharmacy, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, China.

出版信息

Aging Cell. 2024 Jun;23(6):e14135. doi: 10.1111/acel.14135. Epub 2024 Feb 27.

DOI:10.1111/acel.14135
PMID:38414347
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11166364/
Abstract

Epigenetics plays an important role in the aging process, but it is unclear whether epigenetic factors also influence frailty, an age-related state of physiological decline. In this study, we performed a meta-analysis of epigenome-wide association studies in four samples drawn from the Swedish Adoption/Twin Study of Aging (SATSA) and the Longitudinal Study of Aging Danish Twins (LSADT) to explore the association between DNA methylation and frailty. Frailty was defined using the frailty index (FI), and DNA methylation levels were measured in whole blood using Illumina's Infinium HumanMethylation450K and MethylationEPIC arrays. In the meta-analysis consisting of a total of 829 participants, we identified 589 CpG sites that were statistically significantly associated with either the continuous or categorical FI (false discovery rate <0.05). Many of these CpGs have previously been associated with age and age-related diseases. The identified sites were also largely directionally consistent in a longitudinal analysis using mixed-effects models in SATSA, where the participants were followed up to a maximum of 20 years. Moreover, we identified three differentially methylated regions within the MGRN1, MIR596, and TAPBP genes that have been linked to neuronal aging, tumor growth, and immune functions. Furthermore, our meta-analysis results replicated 34 of the 77 previously reported frailty-associated CpGs at p < 0.05. In conclusion, our findings demonstrate robust associations between frailty and DNA methylation levels in 589 novel CpGs, previously unidentified for frailty, and strengthen the role of neuronal/brain pathways in frailty.

摘要

表观遗传学在衰老过程中起着重要作用,但尚不清楚表观遗传因素是否也会影响脆弱性,这是一种与年龄相关的生理衰退状态。在这项研究中,我们对来自瑞典收养/双胞胎衰老研究(SATSA)和丹麦双胞胎衰老纵向研究(LSADT)的四个样本进行了全基因组关联研究的荟萃分析,以探讨 DNA 甲基化与脆弱性之间的关系。脆弱性是通过脆弱指数(FI)来定义的,全血中的 DNA 甲基化水平是使用 Illumina 的 Infinium HumanMethylation450K 和 MethylationEPIC 阵列来测量的。在总共包含 829 名参与者的荟萃分析中,我们鉴定了 589 个与连续或分类 FI(错误发现率 <0.05)统计学显著相关的 CpG 位点。其中许多 CpG 先前与年龄和与年龄相关的疾病有关。在所使用的 SATSA 混合效应模型的纵向分析中,鉴定出的位点也在很大程度上具有一致性,在该研究中,参与者最多可随访 20 年。此外,我们还鉴定了三个位于 MGRN1、MIR596 和 TAPBP 基因内的差异甲基化区域,这些基因与神经元衰老、肿瘤生长和免疫功能有关。此外,我们的荟萃分析结果在 p < 0.05 的水平上复制了之前报道的 77 个脆弱性相关 CpG 中的 34 个。总之,我们的研究结果表明,脆弱性与 589 个新的 CpG 之间存在稳健的关联,这些 CpG 之前未被报道与脆弱性有关,并加强了神经元/大脑通路在脆弱性中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b645/11166364/634163c8cc69/ACEL-23-e14135-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b645/11166364/634163c8cc69/ACEL-23-e14135-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b645/11166364/634163c8cc69/ACEL-23-e14135-g001.jpg

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