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在魔角旋转条件下,通过碳检测的氘固态 NMR 旋转框架弛豫测量研究蛋白质中的甲基。

Carbon-detected deuterium solid-state NMR rotating frame relaxation measurements for protein methyl groups under magic angle spinning.

机构信息

Department of Chemistry, University of Colorado Denver, Denver, CO, 80204, USA.

Department of Mathematics, University of Colorado Denver, Denver, CO, 80204, USA.

出版信息

Solid State Nucl Magn Reson. 2024 Apr;130:101922. doi: 10.1016/j.ssnmr.2024.101922. Epub 2024 Feb 22.

Abstract

Deuterium rotating frame solid-state NMR relaxation measurements (H R) are important tools in quantitative studies of molecular dynamics. We demonstrate how H to C cross-polarization (CP) approaches under 10-40 kHz magic angle spinning rates can be combined with the H R blocks to allow for extension of deuterium rotating frame relaxation studies to methyl groups in biomolecules. This extension permits detection on the C nuclei and, hence, for the achievement of site-specific resolution. The measurements are demonstrated using a nine-residue low complexity peptide with the sequence GGKGMGFGL, in which a single selective -CD label is placed at the methionine residue. Carbon-detected measurements are compared with the deuterium direct-detection results, which allows for fine-tuning of experimental approaches. In particular, we show how the adiabatic respiration CP scheme and the double adiabatic sweep on the H and C channels can be combined with the H R relaxation rates measurement. Off-resonance H R measurements are investigated in addition to the on-resonance condition, as they extent the range of effective spin-locking field.

摘要

氘核转动框架固态 NMR 弛豫测量(H R)是定量研究分子动力学的重要工具。我们展示了如何在 10-40 kHz 魔角旋转速率下将 H 到 C 交叉极化(CP)方法与 H R 块结合使用,从而将氘核转动框架弛豫研究扩展到生物分子中的甲基。这种扩展允许在 C 核上进行检测,从而实现特定位置的分辨率。该测量使用序列为 GGKGMGFGL 的九残基低复杂度肽进行演示,其中在甲硫氨酸残基处放置了一个单一的选择性 -CD 标记。碳检测测量与氘直接检测结果进行了比较,这允许对实验方法进行微调。特别是,我们展示了如何将绝热呼吸 CP 方案和 H 和 C 通道上的双绝热扫频与 H R 弛豫率测量结合使用。除了共振条件外,还研究了离共振 H R 测量,因为它们扩展了有效自旋锁定场的范围。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a35d/11015826/69b45a7bae15/nihms-1979584-f0002.jpg

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