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根结线虫鉴定的分子技术。

Molecular Techniques for Root-Knot Nematode Identification.

机构信息

Embrapa Recursos Genéticos e Biotecnologia, PqEB Parque de Estação Biológica, Brasília, DF, Brazil.

Scientia Terrae Research Institute, Sint-Katelijne-Waver, Belgium.

出版信息

Methods Mol Biol. 2024;2756:227-245. doi: 10.1007/978-1-0716-3638-1_5.

DOI:10.1007/978-1-0716-3638-1_5
PMID:38427296
Abstract

Among plant-parasitic nematodes, root-knot nematodes (RKN), Meloidogyne spp., are the most important parasite infecting economically important crops globally and causing severe losses in crop production. The use of efficient nematode control methods against these parasites depends upon their correct detection in roots and soil samples. Currently, the use of integrated identification methods, including biochemical, molecular, and morphological-based characters, is preferred. But the techniques using morphology and phylogenetic analysis are time-consuming and not suitable for routine analysis. They have only been used for studies of cryptic species, which were identified using integrative taxonomy. Here we describe the enzymatic and molecular-based methods that have successfully been used in Brazil for more than 25 years in the Nematology Lab at Embrapa Genetic Resources and Biotechnology for routine analysis. This technique is a combination of isozyme esterase profiling and molecular markers, with the aim of having a rapid and correct diagnosis of Meloidogyne spp. populations from field and greenhouse.

摘要

在植物寄生线虫中,根结线虫(RKN),尤其是根结线虫属(Meloidogyne spp.),是全球范围内感染重要经济作物的最重要寄生虫,对作物生产造成严重损失。针对这些寄生虫的高效线虫防治方法的应用取决于在根和土壤样本中对它们的正确检测。目前,包括生化、分子和形态学特征在内的综合鉴定方法的应用更为普遍。但是,基于形态学和系统发育分析的技术耗时且不适合常规分析。它们仅用于隐种的研究,这些隐种是通过综合分类学方法来鉴定的。在这里,我们描述了在巴西已经成功使用了 25 年以上的基于酶和分子的方法,这些方法在 Embrapa 遗传资源与生物技术的线虫学实验室中用于常规分析。该技术是同工酶酯酶图谱和分子标记的结合,旨在实现田间和温室中根结线虫属种群的快速和正确诊断。

相似文献

1
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Methods Mol Biol. 2024;2756:227-245. doi: 10.1007/978-1-0716-3638-1_5.
2
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本文引用的文献

1
Species-Specific Molecular Detection of the Root Knot Nematode .根结线虫的物种特异性分子检测
Biology (Basel). 2021 Aug 14;10(8):775. doi: 10.3390/biology10080775.
2
First report of Meloidogyne graminis on golf courses turfgrass in Brazil.禾本科根结线虫在巴西高尔夫球场草坪草上的首次报道。
PLoS One. 2018 Feb 7;13(2):e0192397. doi: 10.1371/journal.pone.0192397. eCollection 2018.
3
Intraspecific variability of the facultative meiotic parthenogenetic root-knot nematode (Meloidogyne graminicola) from rice fields in Vietnam.
越南稻田中兼性减数分裂孤雌生殖根结线虫(禾谷根结线虫)的种内变异性。
C R Biol. 2015 Jul;338(7):471-83. doi: 10.1016/j.crvi.2015.04.002. Epub 2015 May 28.
4
Diversity and evolution of root-knot nematodes, genus Meloidogyne: new insights from the genomic era.根结线虫属(Meloidogyne)的多样性和进化:基因组时代的新见解。
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J Nematol. 1985 Jan;17(1):6-20.
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Isozyme phenotypes for the identification of meloidogyne species.用于鉴定根结线虫种类的同工酶表型。
J Nematol. 1990 Jan;22(1):10-5.
7
Meloidogyne paranaensis n. sp. (Nemata: Meloidogynidae), a Root-Knot Nematode Parasitizing Coffee in Brazil.巴拉那根结线虫新种(线虫纲:根结线虫科),一种寄生于巴西咖啡的根结线虫
J Nematol. 1996 Jun;28(2):177-89.
8
A PCR Assay to Identify and Distinguish Single Juveniles of Meloidogyne hapla and M. chitwoodi.一种用于鉴定和区分南方根结线虫和奇氏根结线虫单个幼虫的聚合酶链式反应检测方法。
J Nematol. 1997 Mar;29(1):9-15.
9
Ribosomal Intergenic Spacer: A Polymerase Chain Reaction Diagnostic for Meloidogyne chitwoodi, M. fallax, and M. hapla.核糖体基因间隔区:一种用于诊断滑刃线虫属的聚合酶链反应方法,包括奇氏短体线虫、腐烂茎线虫和苍白螺旋线虫。
Phytopathology. 2002 Aug;92(8):884-92. doi: 10.1094/PHYTO.2002.92.8.884.
10
Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown Clades.基于小亚基核糖体DNA的全门类分析揭示了线虫之间深层的系统发育关系以及向冠群进化的加速演化。
Mol Biol Evol. 2006 Sep;23(9):1792-800. doi: 10.1093/molbev/msl044. Epub 2006 Jun 21.