Canada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, Canada
Canada's Michael Smith Genome Sciences Centre, Vancouver, British Columbia, Canada.
J Clin Pathol. 2024 May 17;77(6):430-434. doi: 10.1136/jcp-2023-209361.
We demonstrate a method for tissue microdissection using scanning laser ablation that is approximately two orders of magnitude faster than conventional laser capture microdissection. Our novel approach uses scanning laser optics and a slide coating under the tissue that can be excited by the laser to selectively eject regions of tissue for further processing. Tissue was dissected at 0.117 s/mm without reduction in yield, sequencing insert size or base quality compared with undissected tissue. From eight cases, 58-416 mm of tissue was obtained from one to four slides in 7-48 seconds total dissection time per case. These samples underwent exome sequencing and we found the variant allelic fraction increased in regions enriched for tumour as expected. This suggests that our ablation technique may be useful as a tool in both clinical and research labs.
我们展示了一种使用扫描激光烧蚀进行组织微切割的方法,其速度比传统的激光捕获微切割快约两个数量级。我们的新方法使用扫描激光光学和组织下方的载玻片,该载玻片可以被激光激发,从而选择性地弹出组织区域进行进一步处理。与未切割的组织相比,组织的切割速度为 0.117 秒/毫米,而产量、测序插入大小或碱基质量没有降低。在 8 个案例中,从一个到四个载玻片上总共在 7-48 秒内获得了 58-416 毫米的组织,每个案例的总切割时间。这些样本进行了外显子组测序,我们发现,如预期的那样,肿瘤富集区域的变异等位基因分数增加。这表明,我们的烧蚀技术可能是临床和研究实验室的有用工具。