Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, 781039, Assam, India.
Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, 781039, Assam, India.
Anal Chim Acta. 2024 Apr 8;1297:342374. doi: 10.1016/j.aca.2024.342374. Epub 2024 Feb 13.
Understanding Aβ aggregation and inhibiting it at early stages is of utmost importance in treating Alzheimer's and other related amyloidogenic diseases. However, majority of the techniques to study Aβ aggregation mainly target the late stages; while those used to monitor early stages are either expensive, use extrinsic dyes, or do not provide information on molecular level interactions. Here, we investigate the early events of Aβ(KLVFFAE) aggregation using Aβ derived switch-peptides (SwPs) through a novel label-free approach employing Protein Charge Transfer Spectra (ProCharTS).
When pH is increased from 2 to 7.2, the Aβ-derived switch peptides undergo controlled self-assembly, where the initial random coil peptides convert into β-sheet. We leveraged the intrinsic absorbance/luminescence arising from ProCharTS among growing peptide oligomers to observe the aggregation kinetics in real-time. In comparison to monomer, the lysine and glutamate headgroups in the peptide oligomer are expected to come in proximity enhancing ProCharTS intensity due to photoinduced electron transfer. With a combination of Aβ-derived switch-peptides and ProCharTS, we obtained structural insights on the early stages of Aβ-derived SwP aggregation in four unique peptides. Increase in scatter corrected ProCharTS absorbance (250-500 nm) and luminescence (320-720 nm) along with decreased mean luminescence lifetime (2.3-0.8 ns) characterize the initial stages of aggregation monitored for 1-96 h depending on the peptide. We correlated the results with Circular Dichroism (CD), 8-anilino-1-naphthalenesulfonic acid (ANS) and Thioflavin T (ThT) measurements.
We demonstrate ProCharTS as an intrinsic analytical probe with following advantages over other conventional methods to track aggregation: it is a label-free probe; it's intensity can be measured using a UV-Vis spectrophotometer; it is more sensitive in detecting the early molecular events in aggregation compared to ANS and ThT; and it can provide information on specific contacts made between charged headgroups of Lysine/Glutamate in the oligomer.
理解 Aβ 聚集并在早期阶段抑制它对于治疗阿尔茨海默病和其他相关淀粉样变性疾病至关重要。然而,大多数研究 Aβ 聚集的技术主要针对晚期阶段;而那些用于监测早期阶段的技术要么昂贵,要么使用外源性染料,要么无法提供分子水平相互作用的信息。在这里,我们通过一种新的无标记方法——蛋白质电荷转移光谱(ProCharTS),使用 Aβ 衍生的开关肽(SwP)研究 Aβ(KLVFFAE)聚集的早期事件。
当 pH 值从 2 增加到 7.2 时,Aβ 衍生的开关肽经历受控的自组装,其中初始无规卷曲肽转化为β-折叠。我们利用在生长肽寡聚体中产生的 ProCharTS 的固有吸收/发光来实时观察聚集动力学。与单体相比,由于光诱导电子转移,肽寡聚体中的赖氨酸和谷氨酸头基预计会靠近,从而增强 ProCharTS 的强度。通过 Aβ 衍生的开关肽和 ProCharTS 的结合,我们在四种独特的肽中获得了关于 Aβ 衍生的 SwP 聚集早期阶段的结构见解。散射校正后的 ProCharTS 吸收(250-500nm)和发光(320-720nm)增加,以及平均发光寿命(2.3-0.8ns)降低,表明在 1-96h 内监测到的聚集的初始阶段,具体取决于肽。我们将结果与圆二色性(CD)、8-苯胺-1-萘磺酸(ANS)和硫代黄素 T(ThT)测量相关联。
我们证明 ProCharTS 是一种内在的分析探针,与其他传统方法相比,具有以下跟踪聚集的优势:它是一种无标记探针;可以使用紫外可见分光光度计测量其强度;与 ANS 和 ThT 相比,它更能检测聚集过程中的早期分子事件;并且可以提供关于寡聚体中赖氨酸/谷氨酸带电荷头基之间形成的特定接触的信息。