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基于3-苯乙烯基香豆素支架的衍生物作为利什曼病干预的新方法:生物学和分子模拟研究

3-styrylcoumarin scaffold-based derivatives as a new approach for leishmaniasis intervention: biological and molecular modeling studies.

作者信息

Yepes Andrés F, Robledo Sara M, Quintero-Saumeth Jorge, Cardona-Galeano Wilson

机构信息

Chemistry of Colombian Plants, Faculty of Exact and Natural Sciences, Institute of Chemistry, University of Antioquia-UdeA, Calle 70 No. 52-21, A.A 1226, Medellín, Colombia.

Faculty of Medicine, PECET-Medical Research Institute, University of Antioquia-UdeA, Calle 70 No. 52-21, A.A 1226, Medellín, Colombia.

出版信息

J Parasit Dis. 2024 Mar;48(1):81-94. doi: 10.1007/s12639-023-01639-x. Epub 2024 Feb 1.

DOI:10.1007/s12639-023-01639-x
PMID:38440753
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10908709/
Abstract

Seven 3-styrylcoumarins were tested for antileishmanial activity against (Viannia) amastigotes. Cytotoxic activity was also evaluated against mammalian U-937 cells. The 3-methoxy-4-hydroxy coumarin derivative was the most active with an IC of 40.5 µM, and did not reveal any conspicuous toxicity toward mammalian U-937 cells. Therefore, it may have potential to be considered as candidate for antileishmanial drug development. Further, among several druggable Leishmania targets, molecular docking studies revealed that compound had docking preference by the -myristoyltransferase (-NMT) of , showing a higher docking score of - 10.1 kcal mol than positive controls and making this protein as a presumably druggable target for this compound. On the other hand, molecular dynamics simulations affirm the docking hypothesis, showing a conformational stability of the /-NMT complex throughout 100 ns simulation. Moreover, the molecular mechanics/Poisson-Boltzmann surface area method also support the docking findings, revealing a total free energy of binding of - 47.26 ± 0.08 kcal mol, and identifying through energy decomposition analysis that those key aminoacids are contributing strongly to ligand binding. Finally, an optimal pharmacokinetic profile was also estimated for . Altogether, coumarin could be addressed as starting point for further pharmacological studies concerning the therapeutic leishmaniasis intervention.

摘要

对七种3-苯乙烯基香豆素进行了抗(维扬尼亚)无鞭毛体抗利什曼原虫活性测试。还评估了其对哺乳动物U-937细胞的细胞毒性活性。3-甲氧基-4-羟基香豆素衍生物活性最强,IC50为40.5 μM,对哺乳动物U-937细胞未显示出明显毒性。因此,它有可能被视为抗利什曼原虫药物开发的候选物。此外,在几个可成药的利什曼原虫靶点中,分子对接研究表明,该化合物对利什曼原虫的肉豆蔻酰转移酶(-NMT)具有对接偏好,对接分数比阳性对照高-10.1 kcal mol,使该蛋白成为该化合物可能的可成药靶点。另一方面,分子动力学模拟证实了对接假设,在整个100 ns模拟过程中显示了/-NMT复合物的构象稳定性。此外,分子力学/泊松-玻尔兹曼表面积方法也支持对接结果,揭示结合的总自由能为-47.26±0.08 kcal mol,并通过能量分解分析确定那些关键氨基酸对配体结合有很大贡献。最后,还估计了该化合物的最佳药代动力学概况。总之,香豆素可作为进一步开展治疗利什曼病干预药理研究的起点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/826ef8c98b52/12639_2023_1639_Fig8_HTML.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/74e8bf5fc84b/12639_2023_1639_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/01d332ed7dce/12639_2023_1639_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/41d4f032d9cd/12639_2023_1639_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/826ef8c98b52/12639_2023_1639_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/930dfcce08ef/12639_2023_1639_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/57ff9da4a039/12639_2023_1639_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/c8f38835e991/12639_2023_1639_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/68c1e2b35d86/12639_2023_1639_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/74e8bf5fc84b/12639_2023_1639_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/01d332ed7dce/12639_2023_1639_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/41d4f032d9cd/12639_2023_1639_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c41/10908709/826ef8c98b52/12639_2023_1639_Fig8_HTML.jpg

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