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基于二硫键凋亡相关基因的胶质母细胞瘤签名的构建和分子亚型的鉴定,用于预测患者预后和免疫活性。

Creation of signatures and identification of molecular subtypes of glioblastoma based on disulfidptosis-related genes for predicting patient prognosis and immunological activity.

机构信息

Department of Neurosurgery, Shengjing Hospital of China Medical University, No.39 Huaxiang Road, Tiexi District, Shenyang, 110000, Liaoning, People's Republic of China.

Department of Neurosurgery, Shengjing Hospital of China Medical University, No.39 Huaxiang Road, Tiexi District, Shenyang, 110000, Liaoning, People's Republic of China.

出版信息

Asian J Surg. 2024 Aug;47(8):3464-3477. doi: 10.1016/j.asjsur.2024.02.041. Epub 2024 Mar 10.

Abstract

BACKGROUND

In recent times, disulfidptosis, an intricate form of cellular demise, has garnered attention due to its impact on prognosis, tumor progression and treatment response. Nevertheless, the exact significance of disulfidptosis-related genes (DisRGs) in glioblastoma (GBM) remains enigmatic.

METHODS

The GEO and TCGA databases provided transcriptional and clinically relevant data on tumor samples, while the GTEx database provided data on healthy tissues. Disulfidptosis-related genes (DisRGs) were procured from previous scholarly investigations. The expression profile of DisRGs was initially scrutinized among patients diagnosed with GBM, subsequent to which their prognostic value was explored. Through consensus clustering, we constructed DisRGs-related clusters and gene subtypes. Our results established that the DisRG-related clusters had differentially expressed genes, resulting in a DisulfidptosisScore model, which had a positive prognostic value.

RESULTS

The differential expression profile of 24 DisRGs between GBM samples and healthy samples was acquired. Through consensus cluster analysis, two distinct disulfidptosis subtypes, namely DisRGcluster A and DisRGcluster B, were identified. Then, the DisulfidptosisScore model including 4 characteristic genes was constructed.Notably, patients with GBM assigned with lower score demonstrated a considerably longer overall survival (OS) compared to those with higher score.

CONCLUSION

We have effectively devised a prognostic model associated with disulfidptosis, presenting autonomous prognostic predictions for patients with GBM. These findings serve as a valuable addition to the current comprehension of disulfidptosis and offer fresh theoretical substantiation for the development of enhanced treatment strategies.

摘要

背景

近年来,细胞死亡的一种复杂形式——二硫键凋亡,因其对预后、肿瘤进展和治疗反应的影响而受到关注。然而,二硫键凋亡相关基因(DisRGs)在胶质母细胞瘤(GBM)中的确切意义仍然是个谜。

方法

GEO 和 TCGA 数据库提供了肿瘤样本的转录组和临床相关数据,而 GTEx 数据库提供了健康组织的数据。从之前的研究中获取二硫键凋亡相关基因(DisRGs)。首先在诊断为 GBM 的患者中分析 DisRGs 的表达谱,然后探索其预后价值。通过共识聚类,构建 DisRGs 相关聚类和基因亚型。我们的结果表明,DisRG 相关聚类具有差异表达的基因,从而构建了 DisulfidptosisScore 模型,该模型具有阳性预后价值。

结果

获得了 GBM 样本与健康样本之间 24 个 DisRGs 的差异表达谱。通过共识聚类分析,确定了两种不同的二硫键凋亡亚型,即 DisRGcluster A 和 DisRGcluster B。然后,构建了包括 4 个特征基因的 DisulfidptosisScore 模型。值得注意的是,评分较低的 GBM 患者的总生存期(OS)明显长于评分较高的患者。

结论

我们成功构建了一个与二硫键凋亡相关的预后模型,为 GBM 患者提供了自主的预后预测。这些发现丰富了对二硫键凋亡的现有认识,并为开发更有效的治疗策略提供了新的理论依据。

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